NTDB

Overview

Name	clpP	Type	Regulator
Locus tag	C9Q_RS01730	Genome accession	NZ_CP067090
Coordinates	325289..325879 (+)	Length	196 a.a.
NCBI ID	WP_002985850.1	Uniprot ID	A0A9X8T4H8
Organism	Streptococcus pyogenes MGAS10870
Function	degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 320289..330879

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C9Q_RS01715 (C9Q_01725)	-	321102..322547 (-)	1446	WP_011054217.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-
C9Q_RS01720 (C9Q_01730)	-	322635..324269 (+)	1635	WP_011054218.1	polysaccharide biosynthesis protein	-
C9Q_RS01725 (C9Q_01735)	upp	324437..325066 (+)	630	WP_002985854.1	uracil phosphoribosyltransferase	-
C9Q_RS01730 (C9Q_01740)	clpP	325289..325879 (+)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
C9Q_RS01735 (C9Q_01745)	-	326371..326646 (+)	276	WP_002985847.1	YlbG family protein	-
C9Q_RS01740 (C9Q_01750)	tmk	326895..327530 (+)	636	WP_011054219.1	dTMP kinase	-
C9Q_RS01745 (C9Q_01755)	-	327548..328423 (+)	876	WP_011054220.1	DNA polymerase III subunit delta'	-
C9Q_RS01750	-	328442..328588 (+)	147	WP_227868520.1	hypothetical protein	-
C9Q_RS01755 (C9Q_01765)	yabA	329087..329410 (+)	324	WP_011054221.1	DNA replication initiation control protein YabA	-
C9Q_RS01760 (C9Q_01770)	rsmI	329415..330278 (+)	864	WP_011054222.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
C9Q_RS01765 (C9Q_01775)	-	330305..330697 (+)	393	WP_002985833.1	DUF5684 domain-containing protein	-

Sequence

Protein

Download Length: 196 a.a. Molecular weight: 21648.88 Da Isoelectric Point: 5.2834

                                >NTDB_id=524935 C9Q_RS01730 WP_002985850.1 325289..325879(+) (clpP) [Streptococcus pyogenes MGAS10870]

MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN

FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK

TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

Download Length: 591 bp

                                >NTDB_id=524935 C9Q_RS01730 WP_002985850.1 325289..325879(+) (clpP) [Streptococcus pyogenes MGAS10870]

ATGATTCCTGTTGTTATTGAACAAACTAGCCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT

TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA

ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC

TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA

AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA

CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGGAAA

ACGATTAAACAAATTCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA

TGAAATCATGGAAAACAACGAACTAAAATAA

Domains

Predicted by InterproScan.

Clp protease (CLP_protease)

(11-192)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561

Detailed information NTG0524935