Detailed information NTG0524636

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: K6T43_RS12335
• Genome accession: NZ_CP081934
• Coordinates: 2515999..2518824 (-)
• Length: 941 a.a.
• NCBI ID: WP_064970960.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain 20190507E1-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2510999..2523824

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6T43_RS12320 (K6T43_12335)	-	2512691..2513074 (+)	384	WP_064970962.1	HU family DNA-binding protein	-
K6T43_RS12325 (K6T43_12340)	purH	2513857..2515371 (-)	1515	WP_109475004.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
K6T43_RS12330 (K6T43_12345)	-	2515391..2515975 (-)	585	WP_004918918.1	outer membrane beta-barrel protein	-
K6T43_RS12335 (K6T43_12350)	uvrA	2515999..2518824 (-)	2826	WP_064970960.1	excinuclease ABC subunit UvrA	Machinery gene
K6T43_RS12340 (K6T43_12355)	-	2518947..2519891 (-)	945	WP_064970959.1	SPFH domain-containing protein	-
K6T43_RS12345 (K6T43_12360)	-	2519939..2521720 (-)	1782	WP_064970958.1	AMP-dependent synthetase/ligase	-
K6T43_RS12350 (K6T43_12365)	-	2521845..2522984 (+)	1140	WP_064970957.1	acyl-CoA dehydrogenase	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 105495.29 Da
• Isoelectric Point: 7.8642

>NTDB_id=524636 K6T43_RS12335 WP_064970960.1 2515999..2518824(-) (uvrA) [Riemerella anatipestifer strain 20190507E1-1]
MMKNRDFIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARQFLGGLERPDVDKI
EGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVSTAYSLETGKKLQSYTEEQILETIKEQYQNEKVLLLAPLVK
ARKGHYHELFVQLAKKGYSQARIDGILQDIEYDLKLDRYKTHDIEVVIDRWIIGETASEARMQKSLSTALQMGDGVVMVQ
KYNSEEFQYFSKDLMDTATGQALPLPEPNTFSFNSPKGSCPHCKGLGTVKKINPDYLVTEPTLPFQSALLPLETYKFSKW
ALSQIKSILELFDLNLQTPFNKIPKEALDYIYYGCDKEFVKDLKHAGISKKTKINFEGLIPHLEKVIENKENYGATQVER
EFTVEEICTDCNGTRLKPESLAFKIEGKNIAEVNAMSLLDLKDWLSEIKNSFSEKNKIIAHEILKEIETRLGFLLDVGLE
YLSLSRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKSLRDLGNSVLVVEHDKDMILEADE
VLDIGPKAGKYGGKVLWQGSPKDLIKADTITADYLTGRRKIEIPEKRREGNGNSIVLKGATGNNLKNVTLKIPLGKMVVV
TGISGSGKSSLINGTLYPILNRHFYRAVQEPLPYKKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGVFSDIRTLFANLP
ESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEVRYKGKSISDVLDMTIDEAVEF
FQPIPKIYSKVKTLQEVGLGYITLGQQSTTLSGGEAQRVKLATELSKKQTGKTLYILDEPTTGLHFEDVKILMEVIQKLV
DLGNSFIIIEHNMDVIKLADHIIDVGPEGGKNGGSIVAEGTPEEIIKNKKSITGKFLKKEM

Nucleotide

• Length: 2826 bp

>NTDB_id=524636 K6T43_RS12335 WP_064970960.1 2515999..2518824(-) (uvrA) [Riemerella anatipestifer strain 20190507E1-1]
ATGATGAAAAATAGAGATTTCATAGAGGTCTATGGTGCTAGAGAGCATAACTTAAAAAACATTGATGTTAAAATTCCTCG
TAACGAGTTAGTCGTTATTACAGGGCTATCAGGAAGTGGGAAATCTTCTTTAGCATTTGATACTATTTTTGCAGAAGGAC
AAAGGCGTTATATAGAAACATTTTCTGCCTATGCTCGGCAGTTTCTAGGCGGATTAGAACGCCCCGATGTCGATAAAATA
GAAGGACTTTCACCTGTTATCGCCATTGAACAAAAAACCACTAATAAAAACCCTCGTTCTACCGTAGGGACGGTTACAGA
ACTTTATGATTTTCTCAGACTTCTATTTGCTAGGGTTTCCACGGCTTATTCCTTGGAAACAGGTAAAAAGCTACAAAGCT
ATACCGAAGAGCAAATTTTAGAAACCATCAAAGAACAATATCAGAATGAAAAAGTCTTACTTCTAGCACCGCTAGTAAAG
GCTAGAAAAGGGCATTATCATGAGCTGTTTGTACAATTAGCCAAAAAAGGATATTCCCAAGCAAGAATAGACGGCATTTT
ACAAGATATAGAATACGATCTTAAACTAGACCGATACAAAACTCATGATATAGAAGTAGTTATAGACCGTTGGATTATAG
GCGAAACTGCATCTGAAGCTAGAATGCAAAAATCACTTTCTACGGCTTTACAGATGGGTGACGGTGTAGTTATGGTTCAA
AAGTATAATTCGGAAGAGTTTCAGTATTTTTCTAAAGATTTAATGGATACCGCTACAGGACAGGCTTTACCATTACCAGA
ACCAAATACTTTTTCGTTCAATTCTCCTAAGGGAAGTTGTCCTCATTGTAAAGGTTTGGGGACGGTAAAAAAAATCAATC
CTGATTATCTGGTTACCGAGCCTACACTACCCTTCCAGTCGGCACTATTACCATTAGAAACTTATAAATTTAGTAAGTGG
GCTTTATCTCAAATTAAAAGCATTCTAGAATTGTTTGACCTTAACCTACAAACGCCATTTAACAAAATTCCTAAAGAAGC
TTTAGATTACATCTATTACGGCTGTGATAAAGAGTTTGTAAAAGATTTAAAACACGCTGGAATTTCCAAAAAGACTAAAA
TTAACTTTGAAGGGTTAATCCCTCATTTAGAAAAAGTTATAGAAAATAAGGAAAACTACGGTGCTACACAAGTGGAGCGA
GAATTTACTGTAGAAGAAATCTGCACTGACTGTAACGGAACAAGATTAAAACCCGAAAGTTTAGCCTTTAAAATAGAAGG
TAAGAATATAGCTGAAGTTAATGCTATGAGCCTATTAGACTTAAAGGATTGGCTTTCGGAAATAAAAAATAGTTTTAGTG
AAAAGAACAAAATTATCGCCCACGAAATTTTAAAAGAGATAGAAACTCGTTTGGGCTTTTTATTAGATGTAGGACTAGAA
TATCTTAGTCTTAGTAGAAGTAGTAAAACCCTTTCTGGAGGCGAATCCCAAAGGATTCGTTTGGCAACTCAGATAGGCTC
GCAATTAGTAAATGTGCTTTATATTTTAGACGAACCTTCTATTGGGCTTCACCAGAGAGATAATGAAAGACTTATCAACT
CTTTAAAAAGTTTACGAGATTTGGGGAACTCCGTTCTTGTGGTGGAACACGACAAGGATATGATTTTAGAAGCCGATGAA
GTGCTAGATATTGGACCTAAAGCTGGTAAGTATGGCGGAAAAGTATTGTGGCAAGGCAGCCCAAAAGATTTAATAAAAGC
TGACACCATTACAGCAGACTACCTCACAGGAAGAAGAAAAATAGAAATTCCCGAAAAAAGAAGAGAAGGCAACGGTAACT
CGATTGTCCTCAAAGGAGCTACGGGAAATAATCTTAAAAATGTAACCCTAAAAATCCCTTTAGGAAAGATGGTAGTGGTT
ACAGGTATTTCGGGGAGTGGTAAATCTTCGTTAATCAACGGAACACTCTACCCTATTCTCAACCGACATTTTTATCGTGC
TGTACAAGAGCCTCTACCATACAAAAAAATAGAGGGCATAGAGCATATAGACAAAATAGTAGATGTAGACCAAACGCCAA
TTGGTAGAACGCCTCGTTCTAATCCTGCCACTTATACAGGTGTGTTTTCGGATATTCGAACACTATTTGCTAACCTCCCA
GAAAGTAAAATTAGAGGTTATAAGGCAGGGAGATTTTCGTTTAATGTTAAAGGTGGACGCTGCGAAACTTGTCAAGGAGG
TGGTTTGAAAGTGATTGAAATGAATTTCTTGCCTGATGTCTATGTACATTGCGAAACCTGCAACGGCAAACGCTTTAATA
GAGAGACCTTGGAGGTAAGATATAAAGGTAAATCTATATCCGATGTCCTAGATATGACTATAGACGAAGCTGTGGAATTT
TTTCAGCCAATCCCCAAAATCTATTCTAAGGTGAAAACGCTACAAGAAGTTGGTTTAGGTTATATTACCTTAGGACAGCA
GTCTACTACACTTTCAGGCGGAGAGGCTCAAAGGGTAAAATTGGCTACAGAACTTTCTAAGAAACAAACAGGTAAAACAC
TTTATATCTTAGATGAACCTACCACAGGACTGCATTTTGAAGATGTTAAGATTCTGATGGAGGTTATCCAAAAGCTAGTA
GATTTGGGTAACTCTTTTATCATTATTGAACATAATATGGACGTGATAAAACTTGCCGACCATATTATAGATGTAGGTCC
AGAAGGTGGTAAAAATGGAGGAAGCATTGTGGCAGAAGGTACTCCAGAAGAAATTATAAAGAATAAAAAATCTATCACAG
GTAAATTTTTGAAAAAAGAAATGTAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (135-241)

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-391)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	51.801	100	0.52
uvrA	Streptococcus pneumoniae TIGR4	51.801	100	0.52
uvrA	Streptococcus pneumoniae D39	51.801	100	0.52