Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   JHX98_RS01675 Genome accession   NZ_CP067010
Coordinates   304798..305349 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain iGAS376     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 299798..310349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHX98_RS01675 (JHX98_01675) comX/sigX/comX2/sigX2 304798..305349 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  JHX98_RS01680 (JHX98_01680) - 305908..306435 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  JHX98_RS01685 (JHX98_01685) yqeH 306435..307553 (+) 1119 WP_002985994.1 ribosome biogenesis GTPase YqeH -
  JHX98_RS01690 (JHX98_01690) yhbY 307579..307887 (+) 309 WP_200221162.1 ribosome assembly RNA-binding protein YhbY -
  JHX98_RS01695 (JHX98_01695) - 307956..308588 (+) 633 WP_011017338.1 nicotinate-nucleotide adenylyltransferase -
  JHX98_RS01700 (JHX98_01700) yqeK 308585..309178 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  JHX98_RS01705 (JHX98_01705) rsfS 309202..309555 (+) 354 WP_011017339.1 ribosome silencing factor -
  JHX98_RS01710 (JHX98_01710) - 309603..310346 (+) 744 WP_011889139.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=524329 JHX98_RS01675 WP_010921894.1 304798..305349(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain iGAS376]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=524329 JHX98_RS01675 WP_010921894.1 304798..305349(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain iGAS376]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.