Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   JG534_RS07200 Genome accession   NZ_CP066745
Coordinates   1403192..1404376 (-) Length   394 a.a.
NCBI ID   WP_002868491.1    Uniprot ID   A0A0Q3JWH1
Organism   Campylobacter jejuni strain CJP19-D996 isolate CFSAN091032     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1398192..1409376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JG534_RS07175 (JG534_07175) fliL 1399340..1399876 (+) 537 WP_002868488.1 flagellar basal body-associated protein FliL -
  JG534_RS07180 (JG534_07180) acpS 1399876..1400223 (+) 348 WP_002825806.1 holo-ACP synthase -
  JG534_RS07185 (JG534_07185) - 1400224..1400643 (-) 420 WP_002780440.1 hypothetical protein -
  JG534_RS07190 (JG534_07190) - 1400640..1402001 (-) 1362 WP_002868489.1 cytochrome P450 -
  JG534_RS07195 (JG534_07195) - 1401998..1403119 (-) 1122 WP_002868490.1 hypothetical protein -
  JG534_RS07200 (JG534_07200) kpsS 1403192..1404376 (-) 1185 WP_002868491.1 capsule polysaccharide modification protein KpsS Regulator
  JG534_RS07205 (JG534_07205) kpsC 1404373..1406442 (-) 2070 WP_002868492.1 capsular polysaccharide biosynthesis protein -
  JG534_RS07210 (JG534_07210) cysC 1406439..1406951 (-) 513 WP_002868493.1 cytidine diphosphoramidate kinase -
  JG534_RS07215 (JG534_07215) - 1406941..1407702 (-) 762 WP_002825812.1 CTP:phosphoglutamine cytidylyltransferase -
  JG534_RS07220 (JG534_07220) - 1407704..1408306 (-) 603 WP_002859688.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46855.56 Da        Isoelectric Point: 9.9031

>NTDB_id=522290 JG534_RS07200 WP_002868491.1 1403192..1404376(-) (kpsS) [Campylobacter jejuni strain CJP19-D996 isolate CFSAN091032]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=522290 JG534_RS07200 WP_002868491.1 1403192..1404376(-) (kpsS) [Campylobacter jejuni strain CJP19-D996 isolate CFSAN091032]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAACACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Q3JWH1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.731

100

0.987