Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   JF649_RS01440 Genome accession   NZ_CP066541
Coordinates   274260..274811 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS270     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 269260..279811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JF649_RS01440 (JF649_01450) comX/sigX/comX2/sigX2 274260..274811 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  JF649_RS01445 (JF649_01455) - 275370..275897 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  JF649_RS01450 (JF649_01460) yqeH 275897..277015 (+) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  JF649_RS01455 (JF649_01465) yhbY 277040..277348 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  JF649_RS01460 (JF649_01470) - 277417..278049 (+) 633 WP_031488555.1 nicotinate-nucleotide adenylyltransferase -
  JF649_RS01465 (JF649_01475) yqeK 278046..278639 (+) 594 WP_038433908.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  JF649_RS01470 (JF649_01480) rsfS 278663..279016 (+) 354 WP_011017339.1 ribosome silencing factor -
  JF649_RS01475 (JF649_01485) - 279064..279807 (+) 744 WP_014407307.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=520680 JF649_RS01440 WP_010921894.1 274260..274811(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain MGAS270]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=520680 JF649_RS01440 WP_010921894.1 274260..274811(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain MGAS270]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.