Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | JC773_RS04280 | Genome accession | NZ_CP066185 |
| Coordinates | 811935..812516 (+) | Length | 193 a.a. |
| NCBI ID | WP_048723478.1 | Uniprot ID | - |
| Organism | Bacillus cytotoxicus strain PDT2.12 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 806935..817516
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JC773_RS22015 | - | 806941..807237 (-) | 297 | WP_242136565.1 | phage integrase N-terminal SAM-like domain-containing protein | - |
| JC773_RS04245 (JC773_04245) | - | 807924..808130 (+) | 207 | WP_012096140.1 | DUF1657 domain-containing protein | - |
| JC773_RS04250 (JC773_04250) | - | 808221..808709 (+) | 489 | WP_048723473.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| JC773_RS04255 (JC773_04255) | spoVAC | 808744..809220 (+) | 477 | WP_012096142.1 | stage V sporulation protein AC | - |
| JC773_RS04260 (JC773_04260) | spoVAD | 809221..810237 (+) | 1017 | WP_048723474.1 | stage V sporulation protein AD | - |
| JC773_RS04265 (JC773_04265) | spoVAE | 810234..810584 (+) | 351 | WP_012096144.1 | stage V sporulation protein AE | - |
| JC773_RS04270 (JC773_04270) | - | 810596..810802 (+) | 207 | WP_012096145.1 | DUF1657 domain-containing protein | - |
| JC773_RS04275 (JC773_04275) | - | 810823..811692 (+) | 870 | WP_048723476.1 | DUF421 domain-containing protein | - |
| JC773_RS04280 (JC773_04280) | clpP | 811935..812516 (+) | 582 | WP_048723478.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| JC773_RS04285 (JC773_04285) | - | 812908..813165 (-) | 258 | WP_048723480.1 | HPr family phosphocarrier protein | - |
| JC773_RS04290 (JC773_04290) | whiA | 813187..814137 (-) | 951 | WP_012096150.1 | DNA-binding protein WhiA | - |
| JC773_RS04295 (JC773_04295) | - | 814225..815178 (-) | 954 | WP_012096151.1 | YvcK family protein | - |
| JC773_RS04300 (JC773_04300) | rapZ | 815182..816063 (-) | 882 | WP_012096152.1 | RNase adapter RapZ | - |
| JC773_RS04305 (JC773_04305) | - | 816084..816542 (-) | 459 | WP_012096153.1 | 8-oxo-dGTP diphosphatase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21390.67 Da Isoelectric Point: 5.0645
>NTDB_id=518236 JC773_RS04280 WP_048723478.1 811935..812516(+) (clpP) [Bacillus cytotoxicus strain PDT2.12]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGSITAGMAIYDT
MQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLRDKLNKILAERTGQ
PLEVIERDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGSITAGMAIYDT
MQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLRDKLNKILAERTGQ
PLEVIERDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=518236 JC773_RS04280 WP_048723478.1 811935..812516(+) (clpP) [Bacillus cytotoxicus strain PDT2.12]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAATGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCATTTATACATTAACAGCCCTGGTGGTTCTATTACAGCAGGTATGGCAATCTATGACACA
ATGCAGTTCATTAAGCCAAACGTATCAACTATTTGTATCGGTATGGCAGCATCTATGGGTGCATTCCTACTTGCAGCTGG
TGAAAAAGGAAAACGCTTCGCACTTCCAAACAGTGAAGTTATGATCCACCAACCACTTGGTGGTGCACAAGGACAAGCAA
CTGAAATTGAAATCGCTGCAAAACGCATCCTATTCCTACGCGATAAATTAAACAAAATCCTTGCAGAACGCACAGGCCAA
CCACTAGAAGTCATCGAACGCGACACAGACCGTGACAACTTCATGACAGCCGAAAAAGCACTAGAATACGGCCTAATCGA
TAAAATCTTTACAAACCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAATGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCATTTATACATTAACAGCCCTGGTGGTTCTATTACAGCAGGTATGGCAATCTATGACACA
ATGCAGTTCATTAAGCCAAACGTATCAACTATTTGTATCGGTATGGCAGCATCTATGGGTGCATTCCTACTTGCAGCTGG
TGAAAAAGGAAAACGCTTCGCACTTCCAAACAGTGAAGTTATGATCCACCAACCACTTGGTGGTGCACAAGGACAAGCAA
CTGAAATTGAAATCGCTGCAAAACGCATCCTATTCCTACGCGATAAATTAAACAAAATCCTTGCAGAACGCACAGGCCAA
CCACTAGAAGTCATCGAACGCGACACAGACCGTGACAACTTCATGACAGCCGAAAAAGCACTAGAATACGGCCTAATCGA
TAAAATCTTTACAAACCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
92.708 |
99.482 |
0.922 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.617 |
97.409 |
0.668 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus pneumoniae TIGR4 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pneumoniae D39 |
59.375 |
99.482 |
0.591 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pneumoniae Rx1 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pneumoniae R6 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pyogenes JRS4 |
57.812 |
99.482 |
0.575 |
| clpP | Streptococcus pyogenes MGAS315 |
57.812 |
99.482 |
0.575 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus mutans UA159 |
56.995 |
100 |
0.57 |