Detailed information NTG0518051

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: JDY60_RS05295
• Genome accession: NZ_CP066172
• Coordinates: 1100303..1100893 (-)
• Length: 196 a.a.
• NCBI ID: WP_000613467.1
• Uniprot ID: A0AAX0N3L0
• Organism: Streptococcus oralis strain SF100
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1095303..1105893

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JDY60_RS05270 (JDY60_05270)	-	1095993..1096757 (-)	765	WP_001186015.1	ABC transporter ATP-binding protein	-
JDY60_RS05275 (JDY60_05275)	-	1096757..1097713 (-)	957	WP_084849435.1	branched-chain amino acid ABC transporter permease	-
JDY60_RS05280 (JDY60_05280)	-	1097717..1098586 (-)	870	WP_000941413.1	branched-chain amino acid ABC transporter permease	-
JDY60_RS05285 (JDY60_05285)	-	1098706..1099866 (-)	1161	WP_000726128.1	ABC transporter substrate-binding protein	-
JDY60_RS05290 (JDY60_05290)	-	1099955..1100224 (-)	270	WP_000462100.1	YlbG family protein	-
JDY60_RS05295 (JDY60_05295)	clpP	1100303..1100893 (-)	591	WP_000613467.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
JDY60_RS05300 (JDY60_05300)	upp	1101067..1101696 (-)	630	WP_000515974.1	uracil phosphoribosyltransferase	-
JDY60_RS05305 (JDY60_05305)	-	1101785..1102252 (-)	468	WP_000136994.1	cytidine/deoxycytidylate deaminase family protein	-
JDY60_RS05310 (JDY60_05310)	-	1102271..1102828 (-)	558	WP_000003899.1	TetR/AcrR family transcriptional regulator	-
JDY60_RS05315 (JDY60_05315)	-	1102953..1103798 (+)	846	WP_200370206.1	DegV family protein	-
JDY60_RS05320 (JDY60_05320)	-	1103856..1105037 (+)	1182	WP_095726160.1	NAD(P)/FAD-dependent oxidoreductase	-
JDY60_RS05325 (JDY60_05325)	-	1105051..1105572 (+)	522	WP_042767777.1	DUF1697 domain-containing protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21362.37 Da
• Isoelectric Point: 4.4829

>NTDB_id=518051 JDY60_RS05295 WP_000613467.1 1100303..1100893(-) (clpP) [Streptococcus oralis strain SF100]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGK
SVEQIHADAERDYWMSAQETLEYGFIDEIMANNSLS

Nucleotide

• Length: 591 bp

>NTDB_id=518051 JDY60_RS05295 WP_000613467.1 1100303..1100893(-) (clpP) [Streptococcus oralis strain SF100]
ATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCCTATGATATTTACTCTCGTCTTCTGAAAGACCGCAT
CATCATGCTAACAGGTCCAGTTGAAGACAACATGGCCAACTCCGTTATTGCTCAGTTGCTCTTCTTGGATGCCCAAGACA
GCACAAAAGATATTTACCTTTATGTCAATACACCTGGAGGCTCTGTTTCAGCTGGTTTGGCAATCGTTGATACCATGAAC
TTTATCAAAGCGGATGTCCAAACAATCGTTATGGGGATGGCTGCATCCATGGGTACTGTCATCGCATCAAGTGGTGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCAGAGTATATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACCCAACAGA
CAGATATGGCAATCGCTGCAGAGCACTTGCTCAAAACTCGTAAGACTTTGGAGCAAATCCTTGCAGATAACTCTGGTAAA
TCAGTCGAGCAAATTCATGCAGATGCAGAACGTGATTACTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTTATCGA
TGAAATCATGGCCAATAATTCGTTAAGCTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	95.408	100	0.954
clpP	Streptococcus pneumoniae R6	95.408	100	0.954
clpP	Streptococcus pneumoniae TIGR4	95.408	100	0.954
clpP	Streptococcus pneumoniae D39	95.408	100	0.954
clpP	Streptococcus pyogenes JRS4	92.308	99.49	0.918
clpP	Streptococcus pyogenes MGAS315	92.308	99.49	0.918
clpP	Streptococcus thermophilus LMD-9	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	88.718	99.49	0.883
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.692	99.49	0.872
clpP	Lactococcus lactis subsp. cremoris KW2	87.179	99.49	0.867
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571
clpP	Bacillus subtilis subsp. subtilis str. 168	57.292	97.959	0.561