Detailed information NTG0517534

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: I9190_RS19530
• Genome accession: NZ_CP066121
• Coordinates: 4219703..4220761 (-)
• Length: 352 a.a.
• NCBI ID: WP_009587163.1
• Uniprot ID: A0A0A8TS78
• Organism: Acinetobacter bereziniae strain GD0320
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4214703..4225761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I9190_RS19505 (I9190_19505)	aroK	4215015..4215557 (-)	543	WP_004825383.1	shikimate kinase AroK	-
I9190_RS19510 (I9190_19510)	pilQ	4215594..4217765 (-)	2172	WP_058971043.1	type IV pilus secretin PilQ	Machinery gene
I9190_RS19515 (I9190_19515)	comL	4217786..4218316 (-)	531	WP_005034344.1	pilus assembly protein PilP	Machinery gene
I9190_RS19520 (I9190_19520)	comO	4218313..4219065 (-)	753	WP_004825387.1	type 4a pilus biogenesis protein PilO	Machinery gene
I9190_RS19525 (I9190_19525)	pilN	4219062..4219703 (-)	642	WP_004825390.1	PilN domain-containing protein	Machinery gene
I9190_RS19530 (I9190_19530)	comM	4219703..4220761 (-)	1059	WP_009587163.1	pilus assembly protein PilM	Machinery gene
I9190_RS19535 (I9190_19535)	ponA	4220925..4223465 (+)	2541	WP_151780670.1	penicillin-binding protein PBP1a	-
I9190_RS19540 (I9190_19540)	-	4223525..4224328 (-)	804	WP_151780671.1	putative RNA methyltransferase	-
I9190_RS19545 (I9190_19545)	mraY	4224402..4225520 (-)	1119	WP_042089096.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39090.79 Da
• Isoelectric Point: 4.5448

>NTDB_id=517534 I9190_RS19530 WP_009587163.1 4219703..4220761(-) (comM) [Acinetobacter bereziniae strain GD0320]
MLRLYRKQNKGLVGVDISSTTVKILELSVKNGRYWVESYGLSPLIDGSVVEKNILNPEAVADALERAVNLANPQSQNVAV
AVPTSMVIHKIIEMDADMSDEEREVQIRMDAEQYIPFPLDEVSLDFEVLNDKLANPNRVNVLLVATRAENIESRVEVLEI
AGLSPKIADVESYAIERAFDVFSDTLPIGVNLVGILDIGHTMTTLSVMQKGKIIYTREQVFGGKQLTQDVQNRYGLSYEE
AGRAKKDRTLPDDFETEVLMPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDLRKIENDAPSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=517534 I9190_RS19530 WP_009587163.1 4219703..4220761(-) (comM) [Acinetobacter bereziniae strain GD0320]
GTGCTTAGACTATATCGTAAGCAAAATAAGGGGTTGGTAGGAGTAGATATTAGTTCTACTACTGTAAAAATTTTAGAGCT
CTCTGTTAAGAACGGTCGTTACTGGGTTGAAAGTTATGGATTAAGTCCGCTGATTGATGGGAGTGTGGTTGAAAAAAACA
TTCTCAATCCAGAAGCAGTTGCAGATGCATTAGAGCGAGCAGTTAATCTTGCTAACCCTCAATCGCAAAATGTGGCTGTT
GCTGTACCTACTTCTATGGTGATTCATAAAATCATAGAAATGGATGCAGATATGTCCGATGAGGAAAGAGAAGTTCAGAT
TCGAATGGATGCTGAACAATATATTCCTTTTCCTTTGGATGAAGTGAGCTTAGATTTTGAAGTATTGAATGATAAGTTAG
CCAATCCGAATCGAGTGAATGTACTTTTGGTGGCGACACGTGCTGAAAATATTGAGTCTCGTGTTGAAGTTCTGGAAATT
GCAGGCTTATCTCCTAAAATTGCAGATGTAGAAAGCTATGCCATAGAACGTGCATTCGATGTCTTTTCAGATACTTTACC
CATCGGGGTTAATCTTGTTGGGATCTTAGATATTGGTCACACCATGACCACATTGTCTGTGATGCAAAAAGGTAAGATTA
TTTACACGCGTGAGCAGGTGTTTGGGGGCAAACAACTGACACAAGATGTTCAAAATCGTTATGGTTTATCTTATGAGGAA
GCCGGTCGTGCCAAGAAAGACCGCACCTTACCCGATGATTTTGAAACTGAAGTGTTAATGCCGTTTTTAGAAGCTGTGGT
CCAGCAAGCAGCACGTTCATTACAATTCTTCTTCTCCTCCTCACAATTTAATGAGATTGATCATATTTTGCTGGCAGGCG
GAAATGCAAATATCCCAGGTTTGGCAAAATTATTACAACAAAAACTTGGTTATCGCGTCACCATTGCAAATCCATTTTTA
CAAATGGGTTTTTCACCGCAAATTGACTTAAGAAAAATAGAAAATGATGCACCATCACTCATGGTTGCATGTGGCTTAGC
GTTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A0A8TS78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.943	100	0.849
pilM	Acinetobacter baumannii D1279779	84.659	100	0.847
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	43.099	100	0.435