Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6I02_RS02270 Genome accession   NZ_CP066093
Coordinates   457062..459032 (+) Length   656 a.a.
NCBI ID   WP_198463711.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 452062..464032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS02255 (I6I02_02255) - 452778..453674 (+) 897 WP_013990221.1 RluA family pseudouridine synthase -
  I6I02_RS02260 (I6I02_02260) pta 453690..454674 (+) 985 Protein_446 phosphate acetyltransferase -
  I6I02_RS02265 (I6I02_02265) amiA 454911..456881 (+) 1971 WP_198463710.1 peptide ABC transporter substrate-binding protein Regulator
  I6I02_RS02270 (I6I02_02270) amiA3 457062..459032 (+) 1971 WP_198463711.1 peptide ABC transporter substrate-binding protein Regulator
  I6I02_RS02275 (I6I02_02275) amiC 459093..460586 (+) 1494 WP_002886845.1 ABC transporter permease Regulator
  I6I02_RS02280 (I6I02_02280) amiD 460586..461512 (+) 927 WP_002886846.1 oligopeptide ABC transporter permease OppC Regulator
  I6I02_RS02285 (I6I02_02285) amiE 461522..462607 (+) 1086 WP_198463712.1 ABC transporter ATP-binding protein Regulator
  I6I02_RS02290 (I6I02_02290) amiF 462600..463529 (+) 930 WP_049554144.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 656 a.a.        Molecular weight: 72963.37 Da        Isoelectric Point: 5.2858

>NTDB_id=517345 I6I02_RS02270 WP_198463711.1 457062..459032(+) (amiA3) [Streptococcus salivarius strain FDAARGOS_1045]
MKKSKWLALAGVSLLSVGVLVACSSKSNTSSNTYNYIYTADPETLDYLISNKGSTTDAVTNGVDGLLENDKYGNLVPSIA
KDWTVSADGLTYTYKLRKGVKWYTSEGEEYAEVTAKDFVTGLKHAADKKTESIYLAKDSVVGLADYFNGTDKDFSKVGVK
ALDDYTLQYTLKQPEPYWNSKMTYSLFWPVNEEFLKSKGDSFGKSTDPSSILYNGPYILKSLTAKSSIELAKNENYWDKK
NVHFDGIKLSFYDASDQESLVRNFTDGAYSQARLYPTSSNFNSVEKQYKDNIFYTQPSADIGGVGVNIDRQSYNHTSKKT
DAEKDSTKKALLNKDFRQSVNFAIDRTAYSAQLNGEKGAALAVRNLLVKPDFVYAGDKSFGDLVTEKMPSYGDEWSGVNL
KDSQDGLFNADKAKTEFNKAKEALQAQGVQFPIHLDLPVDQAAKPTVARAQSLKQSVEKTLGKENVVVDVHQMSQDDLLN
STLYAANAAAEDWDINISVAWAPDYEDPSTFLDIFKTTASENTKTYMGFDDPNNAAAAQVGLKDFDALVDNAAKETSDLN
VRYERYAEAQAWLEDSSLFMPLMVNKGAAPMVARLTPFSGAYSQVGPKGSDRYFKYLEPQKDVVTKKNYDKARESWLKEK
SKSNEKAQKDLEKHVK

Nucleotide


Download         Length: 1971 bp        

>NTDB_id=517345 I6I02_RS02270 WP_198463711.1 457062..459032(+) (amiA3) [Streptococcus salivarius strain FDAARGOS_1045]
ATGAAAAAAAGTAAATGGTTGGCCCTTGCGGGTGTTTCCCTCCTAAGTGTTGGGGTTTTAGTGGCTTGTTCATCAAAATC
AAACACTTCAAGCAATACTTATAACTATATTTATACTGCTGATCCTGAAACATTGGATTACCTTATTTCCAATAAAGGTT
CAACGACTGATGCTGTGACAAATGGTGTCGATGGCCTTTTGGAAAACGATAAATATGGGAACTTGGTACCTTCTATTGCC
AAGGACTGGACTGTTTCAGCTGATGGTTTGACTTATACTTACAAACTTCGTAAGGGAGTTAAATGGTATACTTCAGAGGG
TGAAGAGTATGCAGAAGTAACAGCTAAAGACTTCGTAACAGGTCTTAAGCATGCTGCTGATAAAAAGACAGAGTCAATTT
ACTTGGCAAAAGATTCTGTAGTAGGTCTTGCTGATTATTTCAATGGTACTGATAAAGACTTCTCTAAAGTTGGCGTTAAA
GCTCTTGATGATTACACTCTTCAGTACACACTTAAACAACCAGAACCTTATTGGAACTCTAAGATGACCTATTCTCTCTT
CTGGCCTGTTAATGAAGAGTTCCTTAAGTCAAAAGGGGATAGCTTTGGTAAATCAACAGATCCATCATCTATCCTTTATA
ATGGTCCGTACATCCTTAAGTCATTGACAGCTAAATCATCTATTGAGTTAGCTAAAAATGAAAACTACTGGGATAAGAAG
AATGTCCACTTCGATGGCATTAAACTTTCTTTCTACGATGCTTCTGACCAAGAATCACTCGTTCGTAATTTCACTGATGG
CGCTTATAGCCAAGCACGTCTATATCCAACAAGCTCAAACTTTAATTCTGTAGAAAAACAATATAAAGATAATATCTTCT
ATACACAACCATCTGCAGATATTGGTGGGGTTGGTGTTAATATTGACCGTCAGTCTTACAACCATACATCTAAGAAGACT
GATGCTGAGAAAGATTCAACTAAGAAAGCTCTTCTTAACAAGGACTTCCGTCAATCAGTTAACTTTGCTATTGACCGTAC
AGCTTATTCAGCACAACTTAATGGTGAAAAAGGTGCAGCACTTGCTGTTCGTAACCTTCTTGTTAAACCTGATTTTGTTT
ATGCTGGTGACAAGTCATTCGGTGATTTGGTAACTGAAAAGATGCCTTCATATGGTGACGAGTGGTCAGGTGTTAACCTT
AAAGACAGTCAAGATGGTCTCTTCAACGCTGATAAGGCTAAGACTGAATTTAATAAAGCTAAGGAAGCTCTCCAAGCACA
AGGTGTTCAATTCCCAATTCACTTGGACCTTCCAGTTGACCAAGCTGCAAAACCAACTGTAGCACGTGCACAATCTTTGA
AACAATCTGTTGAAAAGACACTCGGTAAAGAAAATGTGGTTGTAGACGTTCATCAAATGTCTCAAGATGATCTTCTTAAC
AGTACTTTGTATGCAGCTAACGCAGCAGCAGAAGACTGGGATATCAATATTTCAGTTGCTTGGGCACCTGACTACGAAGA
CCCATCAACATTCCTTGATATCTTCAAGACAACAGCTAGTGAGAACACAAAAACTTACATGGGATTTGACGATCCTAACA
ATGCAGCAGCAGCTCAAGTAGGTCTTAAAGACTTTGATGCTTTGGTTGATAATGCAGCTAAAGAAACAAGCGACCTCAAC
GTACGTTATGAACGTTATGCAGAGGCACAAGCTTGGTTGGAAGATAGCTCACTCTTCATGCCACTTATGGTTAACAAGGG
TGCTGCTCCAATGGTAGCTCGTTTGACACCATTCTCAGGTGCTTACTCTCAAGTAGGACCTAAGGGTTCTGATAGATACT
TCAAGTACCTTGAACCTCAAAAAGATGTTGTCACTAAGAAAAACTATGATAAAGCCCGTGAAAGCTGGCTTAAAGAAAAG
TCTAAGTCCAACGAAAAAGCTCAAAAAGACCTTGAGAAACACGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMG 18311

75.19

100

0.753
  amiA3 Streptococcus thermophilus LMD-9

75.19

100

0.753
  amiA Streptococcus salivarius strain HSISS4

75.152

100

0.752