Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   I6I02_RS02285 Genome accession   NZ_CP066093
Coordinates   461522..462607 (+) Length   361 a.a.
NCBI ID   WP_198463712.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 456522..467607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS02270 (I6I02_02270) amiA3 457062..459032 (+) 1971 WP_198463711.1 peptide ABC transporter substrate-binding protein Regulator
  I6I02_RS02275 (I6I02_02275) amiC 459093..460586 (+) 1494 WP_002886845.1 ABC transporter permease Regulator
  I6I02_RS02280 (I6I02_02280) amiD 460586..461512 (+) 927 WP_002886846.1 oligopeptide ABC transporter permease OppC Regulator
  I6I02_RS02285 (I6I02_02285) amiE 461522..462607 (+) 1086 WP_198463712.1 ABC transporter ATP-binding protein Regulator
  I6I02_RS02290 (I6I02_02290) amiF 462600..463529 (+) 930 WP_049554144.1 ATP-binding cassette domain-containing protein Regulator
  I6I02_RS02295 (I6I02_02295) - 463580..464365 (-) 786 WP_198463713.1 ABC transporter permease -
  I6I02_RS02300 (I6I02_02300) - 464377..465075 (-) 699 WP_002884466.1 ABC transporter ATP-binding protein -
  I6I02_RS02305 (I6I02_02305) - 465080..465457 (-) 378 WP_022496273.1 GntR family transcriptional regulator -
  I6I02_RS02310 (I6I02_02310) - 465639..466433 (+) 795 WP_198463714.1 HAD-IIB family hydrolase -
  I6I02_RS02315 (I6I02_02315) - 466426..467244 (+) 819 WP_037603016.1 Cof-type HAD-IIB family hydrolase -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39876.52 Da        Isoelectric Point: 4.6482

>NTDB_id=517348 I6I02_RS02285 WP_198463712.1 461522..462607(+) (amiE) [Streptococcus salivarius strain FDAARGOS_1045]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGQDL
TKLKSHQDWASIRGAKIATIFQDPMTSLDPIKTIGSQIVEVIVKHQGKSAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACHPDVLICDEPTTALDVTIQAQIIDLLKSLKDEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDKGELFSIPGTPPSLYTPVVGDAFALRSDYAMQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVEKPAVIQNLHEKIRANMGFAHLGDEEEGNA

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=517348 I6I02_RS02285 WP_198463712.1 461522..462607(+) (amiE) [Streptococcus salivarius strain FDAARGOS_1045]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
CATTCGAGGAGTTTCCCTTGATTTGGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGTAAATCAGTTT
TGACTAAGACTTTCACAGGGATGCTTGAAGAAAATGGTCGTGTCGCTAGTGGTTCGATTGATTATCGCGGTCAAGATTTG
ACTAAGCTTAAGAGTCACCAAGATTGGGCATCTATTCGTGGGGCTAAGATTGCAACTATCTTCCAAGATCCTATGACCAG
TCTTGACCCAATTAAGACTATCGGTAGCCAAATTGTTGAAGTCATTGTCAAACACCAAGGAAAATCAGCCAAAGAAGCTA
AAAAAATGGCCATTGATTACATGGACAAGGTTGGTATTCCTGATGCTGAAAAACGTTTCAATGAGTATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCATCCAGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATCGACCTCTTGAAATCACTCAAAGATGAGTACGGTTTCTCAGTGA
TTTTCATTACCCATGACCTTGGTGTGGTAGCAAGTATCGCTGATAAGGTTGCTGTTATGTATGCTGGTGAAATCATTGAG
TATGCAACTGTTGAGGAGATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGCTTGCCACAGTTGGC
TGATGATAAGGGTGAGCTCTTCTCAATTCCAGGGACACCACCATCACTTTATACTCCGGTTGTTGGAGATGCCTTTGCCT
TGCGTTCAGATTATGCCATGCAAATTGACTTCGAGGAAAAAGCACCGCAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCACCAAAAGTTGAAAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCGTGCTAA
TATGGGGTTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

99.169

100

0.992

  amiE Streptococcus thermophilus LMG 18311

96.399

100

0.964

  amiE Streptococcus thermophilus LMD-9

96.399

100

0.964

  oppD Streptococcus mutans UA159

54.441

96.676

0.526