Detailed information NTG0517123

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: I6H74_RS10260
• Genome accession: NZ_CP066069
• Coordinates: 2068295..2068885 (-)
• Length: 196 a.a.
• NCBI ID: WP_002985850.1
• Uniprot ID: A0A9X8T4H8
• Organism: Streptococcus dysgalactiae strain FDAARGOS_1017
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 2063295..2073885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H74_RS10230 (I6H74_10225)	-	2063367..2064320 (-)	954	WP_003062562.1	branched-chain amino acid ABC transporter permease	-
I6H74_RS10235 (I6H74_10230)	-	2064324..2065193 (-)	870	WP_046176981.1	branched-chain amino acid ABC transporter permease	-
I6H74_RS10240 (I6H74_10235)	-	2065382..2066554 (-)	1173	WP_003058679.1	ABC transporter substrate-binding protein	-
I6H74_RS10245 (I6H74_10240)	-	2066802..2067092 (-)	291	WP_115256770.1	YlbG family protein	-
I6H74_RS10250 (I6H74_10245)	-	2067068..2067538 (-)	471	WP_003062005.1	YlbF family regulator	-
I6H74_RS10255 (I6H74_10250)	-	2067613..2067909 (-)	297	WP_115256769.1	DUF4298 domain-containing protein	-
I6H74_RS10260 (I6H74_10255)	clpP	2068295..2068885 (-)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
I6H74_RS10265 (I6H74_10260)	upp	2069107..2069736 (-)	630	WP_003058279.1	uracil phosphoribosyltransferase	-
I6H74_RS10270 (I6H74_10265)	-	2069935..2071569 (-)	1635	WP_115256768.1	polysaccharide biosynthesis protein	-
I6H74_RS10275 (I6H74_10270)	-	2071657..2073102 (+)	1446	WP_003054161.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=517123 I6H74_RS10260 WP_002985850.1 2068295..2068885(-) (clpP) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=517123 I6H74_RS10260 WP_002985850.1 2068295..2068885(-) (clpP) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGTGAACGTTCTTATGATATTTACTCACGCTTATTAAAAGACCGTAT
TATCATGTTGACAGGCCCTGTTGAGGACAACATGGCAAACTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAGGACA
ATACGAAAGACATTTATTTGTATGTCAACACACCTGGTGGTTCTGTTTCAGCGGGTTTGGCTATTGTCGACACCATGAAC
TTTATCAAAGCTGATGTCCAAACCATTGTTATGGGGATGGCCGCTTCTATGGGGACTGTCATTGCTTCATCAGGTACTAA
GGGCAAACGCTTCATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACACAACAAA
CAGATATGGCCATTGCTGCAGAGCACCTCTTAAAAACTCGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGAAAG
ACCATTAAACAAATTCACAAAGATGCTGAACGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAATAACGAATTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561