Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   JAN99_RS07710 Genome accession   NZ_CP065927
Coordinates   1569339..1569890 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm9ST603     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1564339..1574890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JAN99_RS07675 (JAN99_07670) - 1564343..1565086 (-) 744 WP_168641518.1 class I SAM-dependent methyltransferase -
  JAN99_RS07680 (JAN99_07675) rsfS 1565134..1565487 (-) 354 WP_011017339.1 ribosome silencing factor -
  JAN99_RS07685 (JAN99_07680) yqeK 1565511..1566104 (-) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  JAN99_RS07690 (JAN99_07685) - 1566101..1566733 (-) 633 WP_111693015.1 nicotinate-nucleotide adenylyltransferase -
  JAN99_RS07695 (JAN99_07690) yhbY 1566802..1567110 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  JAN99_RS07700 (JAN99_07695) yqeH 1567135..1568253 (-) 1119 WP_136116219.1 ribosome biogenesis GTPase YqeH -
  JAN99_RS07705 (JAN99_07700) - 1568253..1568780 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  JAN99_RS07710 (JAN99_07705) comX/sigX/comX2/sigX2 1569339..1569890 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=515383 JAN99_RS07710 WP_010921894.1 1569339..1569890(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm9ST603]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=515383 JAN99_RS07710 WP_010921894.1 1569339..1569890(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm9ST603]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.