Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I8T81_RS03425 Genome accession   NZ_CP065820
Coordinates   699961..700344 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter seifertii strain S21     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 694961..705344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I8T81_RS03415 (I8T81_03415) - 697861..698979 (-) 1119 WP_198072120.1 efflux RND transporter periplasmic adaptor subunit -
  I8T81_RS03420 (I8T81_03420) - 699039..699677 (-) 639 WP_198072121.1 hypothetical protein -
  I8T81_RS03425 (I8T81_03425) pilG 699961..700344 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  I8T81_RS03430 (I8T81_03430) - 700368..700730 (+) 363 WP_004705774.1 PleD family two-component system response regulator -
  I8T81_RS03435 (I8T81_03435) - 700788..701324 (+) 537 WP_004705775.1 chemotaxis protein CheW -
  I8T81_RS03440 (I8T81_03440) - 701371..703452 (+) 2082 WP_151761890.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=514741 I8T81_RS03425 WP_000389061.1 699961..700344(+) (pilG) [Acinetobacter seifertii strain S21]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=514741 I8T81_RS03425 WP_000389061.1 699961..700344(+) (pilG) [Acinetobacter seifertii strain S21]
ATGGAAGATGCGTTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACAGCAGAAACATTATT
GCAACGAGAAGGTTGTGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TCGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCAAGTAAAGATGGTCTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCATTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37