Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   I8T81_RS02510 Genome accession   NZ_CP065820
Coordinates   512344..513228 (+) Length   294 a.a.
NCBI ID   WP_004705430.1    Uniprot ID   N8R1G5
Organism   Acinetobacter seifertii strain S21     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 507344..518228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I8T81_RS02485 (I8T81_02485) - 507740..508987 (-) 1248 WP_198072046.1 YihY family inner membrane protein -
  I8T81_RS02490 (I8T81_02490) wrbA 509275..509868 (+) 594 WP_174724368.1 NAD(P)H:quinone oxidoreductase -
  I8T81_RS02495 (I8T81_02495) - 509922..510497 (-) 576 WP_002050789.1 xanthine phosphoribosyltransferase -
  I8T81_RS02500 (I8T81_02500) - 510569..511282 (-) 714 WP_151749370.1 DUF3108 domain-containing protein -
  I8T81_RS02505 (I8T81_02505) - 511440..512111 (-) 672 WP_004705429.1 hypothetical protein -
  I8T81_RS02510 (I8T81_02510) tonB2 512344..513228 (+) 885 WP_004705430.1 energy transducer TonB Machinery gene
  I8T81_RS02515 (I8T81_02515) ybeY 513316..513795 (-) 480 WP_198072047.1 rRNA maturation RNase YbeY -
  I8T81_RS02520 (I8T81_02520) - 514072..515160 (-) 1089 WP_198072048.1 PhoH family protein -
  I8T81_RS02525 (I8T81_02525) miaB 515198..516649 (-) 1452 WP_068935662.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33577.40 Da        Isoelectric Point: 8.3836

>NTDB_id=514740 I8T81_RS02510 WP_004705430.1 512344..513228(+) (tonB2) [Acinetobacter seifertii strain S21]
MLKKRSLPIEPFLYWWQDRVFIVAIILAILLHTLVLLIHFAMPAPSEQSTKEIAISIRPAEDAVKHADFLAQADQQGSGT
FREAHRMSSNSPTPMTTDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLESQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHSVLDEAAKASVRRGAPFGRFDSNMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=514740 I8T81_RS02510 WP_004705430.1 512344..513228(+) (tonB2) [Acinetobacter seifertii strain S21]
ATGTTGAAAAAAAGAAGTCTTCCTATAGAGCCTTTTCTTTATTGGTGGCAAGACCGAGTCTTTATTGTTGCAATAATACT
CGCAATCTTGTTGCATACTCTTGTGCTGCTTATTCATTTTGCTATGCCTGCGCCGTCAGAGCAATCCACGAAAGAAATCG
CTATATCTATTCGTCCTGCTGAGGATGCTGTTAAGCATGCAGATTTTTTAGCGCAAGCAGACCAACAAGGTTCAGGAACT
TTTAGAGAGGCTCATCGGATGTCTAGTAATTCTCCGACGCCTATGACTACTGATGCTTCAACGGGAGAAGCCCAGTTAGA
AACTTTAGAAAAAGTACAGCAACAACGAGAACTTAAGTTTGAAGAAAAAGTACTTATGACTGTGTTGAGCTGGCAGAAAC
AAGCTGAGGAGAGTCAAAGAAAGAAAGCACTTGAGCAATTAGAAAGCCAGTTTCAAGCTAAAGCTGCAATGGTCGCGAGC
CTAGAAGCTCAATATTTACAACGTCAGCAAGATTTCAGTCGTCAACAAAAAATAAAAACAGTCGATGGTATTCAAGCCAA
GAAAGATGCTTCAGCAGCTTATTTAGATAAGTTCCGTGAAAAGGTGGAGCTTTACGGTAACCGTTATTATCCAGAAGAAG
CTAAACAACAACAATTAAAAGGTGAAGTTCGCCTTATGGTGATTTTGAATGCTCAAGGGGGCATTCGTGCAATTCGTTTA
CTTGAAAGTTCAGGACACTCAGTTTTAGATGAAGCTGCAAAAGCTTCTGTACGCCGTGGTGCGCCATTTGGTCGTTTTGA
TAGCAATATGAAAGATATTTCTGAGCTACGTATTATTCGTACTTGGCGTTTTGATCCAGCTGAAGCTGAATTTGAGGTAC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N8R1G5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

94.898

100

0.949