Detailed information NTG0513010

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: I6G50_RS03615
• Genome accession: NZ_CP065691
• Coordinates: 709706..710554 (-)
• Length: 282 a.a.
• NCBI ID: WP_081167264.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain FDAARGOS_893
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 704706..715554

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G50_RS03600 (I6G50_03600)	-	705665..705886 (+)	222	WP_197909200.1	hypothetical protein	-
I6G50_RS03605 (I6G50_03605)	trmFO	705943..707289 (-)	1347	WP_197909201.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
I6G50_RS03610 (I6G50_03610)	topA	707350..709500 (-)	2151	WP_197909202.1	type I DNA topoisomerase	-
I6G50_RS03615 (I6G50_03615)	dprA	709706..710554 (-)	849	WP_081167264.1	DNA-processing protein DprA	Machinery gene
I6G50_RS03620 (I6G50_03620)	budA	710640..711338 (-)	699	WP_081167267.1	acetolactate decarboxylase	-
I6G50_RS03625 (I6G50_03625)	-	711563..713287 (-)	1725	WP_003136193.1	ABC transporter permease/substrate binding protein	-
I6G50_RS03630 (I6G50_03630)	-	713280..714482 (-)	1203	WP_003136194.1	quaternary amine ABC transporter ATP-binding protein	-
I6G50_RS03635 (I6G50_03635)	-	714688..715308 (-)	621	WP_003136197.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 32125.14 Da
• Isoelectric Point: 9.7566

>NTDB_id=513010 I6G50_RS03615 WP_081167264.1 709706..710554(-) (dprA) [Lactococcus garvieae strain FDAARGOS_893]
MIRNFEILRLKRAGMSNLSVWKLIQYQKEHREKLTLRQKARVSEIKNLPDFLENYKNQDIKSLRALYKTFPSFSIMDDIY
PERLKEMYNPPVLLFYQGNLELLNLPKIGFVGSREASKDGIKITHKLIEELERNFVIVSGLARGIDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQDYLAANELILSEYLAGEPPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSKWALEEN
RDVFAVPGDILSRHSSGCNSLIQQGAKLITHGKDILEDYVFD

Nucleotide

• Length: 849 bp

>NTDB_id=513010 I6G50_RS03615 WP_081167264.1 709706..710554(-) (dprA) [Lactococcus garvieae strain FDAARGOS_893]
ATGATTAGAAACTTTGAAATATTGCGATTAAAAAGGGCGGGGATGTCCAATCTTAGTGTTTGGAAACTGATTCAGTATCA
GAAAGAACATCGGGAAAAACTGACTTTACGACAAAAGGCGCGTGTCTCTGAGATTAAAAATCTTCCTGATTTTCTTGAAA
ACTATAAGAATCAAGATATTAAATCGCTAAGAGCTCTTTATAAAACTTTTCCTTCTTTTTCAATAATGGATGATATTTAT
CCAGAAAGACTCAAAGAGATGTATAATCCCCCGGTACTTCTTTTTTATCAAGGAAATCTTGAACTTCTTAACCTCCCTAA
GATTGGTTTTGTTGGGAGTCGTGAAGCATCTAAAGACGGTATAAAGATTACGCATAAGCTTATTGAAGAACTAGAAAGAA
ACTTTGTTATTGTAAGTGGATTAGCACGAGGCATTGATACATCAAGCCATGTTGCTGCTGTTAAGCAAAAAACACCTACC
ATTGCGGTTATAGGTAACGGGTTAGATATAAGCTATCCTAAAGAAAACCGTAAATTGCAAGACTATTTAGCAGCAAATGA
ATTGATCTTGTCAGAATATTTAGCAGGAGAGCCACCACTAAAGTTTCATTTTCCTGAACGAAACCGAATTATTGCAGGAC
TTTCTAGAGGAATCGTTGTAGTTGAAGCCAAACAACGCAGTGGAAGCTTAATTACTAGTAAATGGGCTTTAGAAGAAAAT
CGTGATGTGTTTGCTGTACCAGGAGATATTTTAAGCAGGCATTCTTCTGGTTGCAACAGTTTGATTCAGCAAGGGGCAAA
ACTTATTACACATGGAAAAGATATCTTGGAAGACTATGTATTTGACTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-270)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.121	100	0.631
dprA	Streptococcus mutans UA159	57.554	98.582	0.567
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus mitis SK321	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.929	99.291	0.535
dprA	Bacillus subtilis subsp. subtilis str. 168	42.46	89.362	0.379
dprA	Acinetobacter baylyi ADP1	36.972	100	0.372
dprA	Legionella pneumophila strain ERS1305867	44.068	83.688	0.369