Detailed information NTG0507783

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: I2438_RS08660
• Genome accession: NZ_CP065190
• Coordinates: 1758113..1758703 (-)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ36
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1753113..1763703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2438_RS08625 (HCFMJIKG_01713)	rsmI	1753453..1754319 (-)	867	WP_165619413.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
I2438_RS08630 (HCFMJIKG_01714)	yabA	1754324..1754647 (-)	324	WP_012516195.1	DNA replication initiation control protein YabA	-
I2438_RS08635 (HCFMJIKG_01715)	ricT	1754640..1755440 (-)	801	WP_231146490.1	regulatory iron-sulfur-containing complex subunit RicT	-
I2438_RS08640 (HCFMJIKG_01716)	-	1755437..1756312 (-)	876	WP_231146489.1	DNA polymerase III subunit delta'	-
I2438_RS08645 (HCFMJIKG_01717)	tmk	1756326..1756961 (-)	636	WP_231146488.1	dTMP kinase	-
I2438_RS08650 (HCFMJIKG_01718)	-	1757277..1757561 (-)	285	WP_012516199.1	YlbG family protein	-
I2438_RS08655 (HCFMJIKG_01719)	-	1757562..1758008 (-)	447	WP_012516200.1	YlbF family regulator	-
I2438_RS08660 (HCFMJIKG_01720)	clpP	1758113..1758703 (-)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
I2438_RS08665 (HCFMJIKG_01721)	upp	1758935..1759564 (-)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
I2438_RS08670 (HCFMJIKG_01722)	-	1759714..1761345 (-)	1632	WP_231146487.1	putative polysaccharide biosynthesis protein	-
I2438_RS08675 (HCFMJIKG_01723)	-	1761431..1762876 (+)	1446	WP_021321090.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=507783 I2438_RS08660 WP_012677455.1 1758113..1758703(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain SEZ36]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=507783 I2438_RS08660 WP_012677455.1 1758113..1758703(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain SEZ36]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGACATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCTTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAATATATGATTCACCAGCCTATGGGAGGCACAGGAGGTGGTACGCAGCAGA
CGGATATGGCCATTGCTGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTATTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566