Detailed information NTG0506589

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: I2437_RS01900
• Genome accession: NZ_CP065061
• Coordinates: 364352..364942 (+)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ33
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 359352..369942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2437_RS01885 (IEMOCGPF_00374)	-	360179..361624 (-)	1446	WP_206157920.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-
I2437_RS01890 (IEMOCGPF_00375)	-	361710..363341 (+)	1632	WP_206157921.1	polysaccharide biosynthesis protein	-
I2437_RS01895 (IEMOCGPF_00376)	upp	363491..364120 (+)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
I2437_RS01900 (IEMOCGPF_00377)	clpP	364352..364942 (+)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
I2437_RS01905 (IEMOCGPF_00378)	-	365037..365483 (+)	447	WP_206157922.1	YlbF family regulator	-
I2437_RS01910 (IEMOCGPF_00379)	-	365484..365768 (+)	285	WP_012677457.1	YlbG family protein	-
I2437_RS01915 (IEMOCGPF_00380)	tmk	366084..366719 (+)	636	WP_012680032.1	dTMP kinase	-
I2437_RS01920 (IEMOCGPF_00381)	-	366733..367608 (+)	876	WP_165627630.1	DNA polymerase III subunit delta'	-
I2437_RS01925 (IEMOCGPF_00382)	ricT	367605..368405 (+)	801	WP_042671214.1	regulatory iron-sulfur-containing complex subunit RicT	-
I2437_RS01930 (IEMOCGPF_00383)	yabA	368398..368721 (+)	324	WP_012680029.1	DNA replication initiation control protein YabA	-
I2437_RS01935 (IEMOCGPF_00384)	rsmI	368726..369592 (+)	867	WP_012516194.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=506589 I2437_RS01900 WP_012677455.1 364352..364942(+) (clpP) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=506589 I2437_RS01900 WP_012677455.1 364352..364942(+) (clpP) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGTTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGATATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTTTAGCTATTGTTGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCTTCTATGGGAACTGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAATATATGATTCACCAGCCTATGGGAGGTACAGGAGGTGGTACGCAGCAGA
CGGATATGGCCATTGCTGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTATTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566