Detailed information NTG0506356

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: I2433_RS02240
• Genome accession: NZ_CP065056
• Coordinates: 435474..436064 (+)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ14
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 430474..441064

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2433_RS02225 (JDBNIEOD_00437)	-	431301..432746 (-)	1446	WP_206152391.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-
I2433_RS02230 (JDBNIEOD_00438)	-	432832..434463 (+)	1632	WP_206152392.1	polysaccharide biosynthesis protein	-
I2433_RS02235 (JDBNIEOD_00439)	upp	434613..435242 (+)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
I2433_RS02240 (JDBNIEOD_00440)	clpP	435474..436064 (+)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
I2433_RS02245 (JDBNIEOD_00441)	-	436159..436605 (+)	447	WP_111692724.1	YlbF family regulator	-
I2433_RS02250 (JDBNIEOD_00442)	-	436606..436890 (+)	285	WP_206152393.1	YlbG family protein	-
I2433_RS02255 (JDBNIEOD_00443)	tmk	437203..437838 (+)	636	WP_206152394.1	dTMP kinase	-
I2433_RS02260 (JDBNIEOD_00444)	-	437852..438727 (+)	876	WP_206152395.1	DNA polymerase III subunit delta'	-
I2433_RS02265 (JDBNIEOD_00445)	ricT	438724..439524 (+)	801	WP_012677460.1	regulatory iron-sulfur-containing complex subunit RicT	-
I2433_RS02270 (JDBNIEOD_00446)	yabA	439517..439840 (+)	324	WP_012680029.1	DNA replication initiation control protein YabA	-
I2433_RS02275 (JDBNIEOD_00447)	rsmI	439845..440711 (+)	867	WP_206152396.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=506356 I2433_RS02240 WP_012677455.1 435474..436064(+) (clpP) [Streptococcus equi subsp. zooepidemicus strain SEZ14]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=506356 I2433_RS02240 WP_012677455.1 435474..436064(+) (clpP) [Streptococcus equi subsp. zooepidemicus strain SEZ14]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGTTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGATATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTTTAGCTATTGTTGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCTTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAATATATGATTCACCAGCCTATGGGAGGTACAGGAGGTGGTACGCAGCAGA
CGGATATGGCCATTGCTGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTACTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566