Detailed information NTG0506320

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: I2432_RS08310
• Genome accession: NZ_CP065054
• Coordinates: 1757451..1758041 (-)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ13
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1752451..1763041

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2432_RS08275 (LJFMMFNO_01653)	rsmI	1752794..1753660 (-)	867	WP_111678449.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
I2432_RS08280 (LJFMMFNO_01654)	yabA	1753665..1753988 (-)	324	WP_012680029.1	DNA replication initiation control protein YabA	-
I2432_RS08285 (LJFMMFNO_01655)	ricT	1753981..1754781 (-)	801	WP_206158726.1	regulatory iron-sulfur-containing complex subunit RicT	-
I2432_RS08290 (LJFMMFNO_01656)	-	1754778..1755653 (-)	876	WP_111678453.1	DNA polymerase III subunit delta'	-
I2432_RS08295 (LJFMMFNO_01657)	tmk	1755667..1756302 (-)	636	WP_111678859.1	dTMP kinase	-
I2432_RS08300 (LJFMMFNO_01658)	-	1756617..1756901 (-)	285	WP_043053379.1	YlbG family protein	-
I2432_RS08305 (LJFMMFNO_01659)	-	1756902..1757348 (-)	447	WP_037579848.1	YlbF family regulator	-
I2432_RS08310 (LJFMMFNO_01660)	clpP	1757451..1758041 (-)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
I2432_RS08315 (LJFMMFNO_01661)	upp	1758273..1758902 (-)	630	WP_206158727.1	uracil phosphoribosyltransferase	-
I2432_RS08320 (LJFMMFNO_01662)	-	1759052..1760683 (-)	1632	WP_043031351.1	polysaccharide biosynthesis protein	-
I2432_RS08325 (LJFMMFNO_01663)	-	1760769..1762214 (+)	1446	WP_206158728.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=506320 I2432_RS08310 WP_012677455.1 1757451..1758041(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=506320 I2432_RS08310 WP_012677455.1 1757451..1758041(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGACATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCCTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAGTACATGATTCACCAGCCTATGGGAGGCACAGGTGGTGGTACACAGCAGA
CAGATATGGCCATTGCGGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTACTGGATGAGCGCAGAAGAGACCCTAGCCTATGGCTTTATTGA
TGAAATTATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566