Detailed information NTG0500424

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: IQ680_RS19835
• Genome accession: NZ_CP064266
• Coordinates: 3886859..3887440 (+)
• Length: 193 a.a.
• NCBI ID: WP_243526541.1
• Uniprot ID: -
• Organism: Bacillus pseudomycoides strain N451-2
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3881859..3892440

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IQ680_RS19795	-	3882016..3882330 (-)	315	WP_243522080.1	DUF1232 domain-containing protein	-
IQ680_RS19800	-	3882522..3882791 (+)	270	WP_243522081.1	hypothetical protein	-
IQ680_RS19805	-	3882866..3884176 (+)	1311	WP_243522083.1	DEAD/DEAH box helicase	-
IQ680_RS19810	-	3884551..3884634 (+)	84	WP_097848399.1	MW1434 family type I TA system toxin	-
IQ680_RS19815	-	3884634..3884897 (+)	264	WP_243522086.1	Gp49 family protein	-
IQ680_RS19820	rpiA	3885003..3885665 (-)	663	WP_243522088.1	ribose 5-phosphate isomerase A	-
IQ680_RS19825	-	3885682..3886002 (-)	321	WP_243522090.1	2Fe-2S iron-sulfur cluster-binding protein	-
IQ680_RS19830	-	3886148..3886837 (+)	690	WP_243522091.1	RNA polymerase subunit sigma-70	-
IQ680_RS19835	clpP	3886859..3887440 (+)	582	WP_243526541.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
IQ680_RS19840	-	3887721..3888026 (-)	306	WP_243522093.1	hypothetical protein	-
IQ680_RS19845	-	3888453..3889310 (-)	858	WP_243522094.1	glycine betaine ABC transporter substrate-binding protein	-
IQ680_RS19850	-	3889501..3890706 (+)	1206	WP_243522096.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
IQ680_RS19855	-	3890699..3891538 (+)	840	WP_018766032.1	proline/glycine betaine ABC transporter permease	-
IQ680_RS19860	-	3891611..3891856 (-)	246	Protein_3838	hypothetical protein	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21132.52 Da
• Isoelectric Point: 5.0854

>NTDB_id=500424 IQ680_RS19835 WP_243526541.1 3886859..3887440(+) (clpP) [Bacillus pseudomycoides strain N451-2]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLAGAKGKRLALPNSEIMIHQPLGGVKGQATEIEITAKRIVKLKHDINKIISDRTGQ
PIEKIALDTERDYFMTAEEAKAYGIVDAVIEKK

Nucleotide

• Length: 582 bp

>NTDB_id=500424 IQ680_RS19835 WP_243526541.1 3886859..3887440(+) (clpP) [Bacillus pseudomycoides strain N451-2]
ATGAATGCAATTCCGTATGTTGTAGAACAAACAAAATTAGGAGAACGCTCCTATGATATATATTCAAGGTTGTTAAAAGA
CCGTATTGTCATGATTGGATCAGAAATTAATGATCAAGTAGCAAGCAGTGTAGTGGCACAGTTATTATTTTTAGAAGCAG
AAGATGCGGAGAAGGATATTTTTCTTTATATCAATAGTCCAGGAGGCTCAACTACAGCGGGATTTGCGATATTAGATACA
ATGAATTTGATTAAACCTGATGTTCAAACGCTTTGTATGGGATTCGCAGCTTCATTTGGAGCGCTATTATTACTCGCTGG
AGCGAAAGGGAAAAGACTTGCGCTTCCAAATAGTGAAATTATGATTCATCAGCCGCTTGGCGGAGTGAAAGGGCAAGCGA
CAGAGATTGAAATAACCGCAAAGCGAATAGTAAAGCTAAAACATGATATTAACAAAATCATATCAGATCGAACAGGTCAA
CCAATTGAAAAGATAGCCCTTGATACAGAAAGAGATTACTTTATGACTGCGGAAGAAGCGAAGGCATATGGCATTGTCGA
CGCTGTTATTGAAAAGAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	67.368	98.446	0.663
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.196	97.927	0.658
clpP	Streptococcus pyogenes JRS4	54.688	99.482	0.544
clpP	Streptococcus pyogenes MGAS315	54.688	99.482	0.544
clpP	Streptococcus mutans UA159	54.737	98.446	0.539
clpP	Streptococcus thermophilus LMD-9	54.497	97.927	0.534
clpP	Streptococcus thermophilus LMG 18311	54.497	97.927	0.534
clpP	Streptococcus pneumoniae Rx1	53.968	97.927	0.528
clpP	Streptococcus pneumoniae D39	53.968	97.927	0.528
clpP	Streptococcus pneumoniae R6	53.968	97.927	0.528
clpP	Streptococcus pneumoniae TIGR4	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	50.521	99.482	0.503
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	49.479	99.482	0.492