Detailed information NTG0499693

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: KKZ08_RS24040
• Genome accession: NZ_CP075691
• Coordinates: 5292353..5293012 (-)
• Length: 219 a.a.
• NCBI ID: WP_223776419.1
• Uniprot ID: -
• Organism: Streptomyces sp. 135
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 5287353..5298012

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KKZ08_RS24010	-	5287788..5288609 (+)	822	WP_223776415.1	alpha/beta fold hydrolase	-
KKZ08_RS24015	-	5288591..5288974 (-)	384	WP_223776416.1	VOC family protein	-
KKZ08_RS24020	-	5289171..5290167 (-)	997	Protein_4738	NAD(P)-dependent alcohol dehydrogenase	-
KKZ08_RS24025	-	5290298..5291218 (+)	921	WP_223776417.1	helix-turn-helix domain-containing protein	-
KKZ08_RS24030	-	5291327..5291698 (+)	372	WP_223779163.1	helix-turn-helix transcriptional regulator	-
KKZ08_RS24035	clpP	5291724..5292338 (-)	615	WP_223776418.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KKZ08_RS24040	clpP	5292353..5293012 (-)	660	WP_223776419.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KKZ08_RS24045	-	5293199..5293654 (+)	456	WP_223776420.1	hypothetical protein	-
KKZ08_RS24050	msrA	5293884..5294588 (-)	705	WP_223776421.1	peptide-methionine (S)-S-oxide reductase MsrA	-
KKZ08_RS24055	-	5294696..5295814 (-)	1119	WP_223776422.1	hypothetical protein	-
KKZ08_RS24060	-	5295916..5297079 (+)	1164	WP_223776423.1	cystathionine gamma-synthase	-
KKZ08_RS24065	-	5297098..5297352 (-)	255	WP_223776424.1	hypothetical protein	-
KKZ08_RS24070	-	5297390..5297872 (-)	483	WP_223776425.1	sigma factor-like helix-turn-helix DNA-binding protein	-

Sequence

Protein

• Length: 219 a.a.
• Molecular weight: 23680.73 Da
• Isoelectric Point: 4.9265

>NTDB_id=499693 KKZ08_RS24040 WP_223776419.1 5292353..5293012(-) (clpP) [Streptomyces sp. 135]
MSVLGSGWDAVVRPRGEDGDTAPSRFDDHLAAQLLNQRIVFLGTQVDEVSANRVCAQMLLLSAEDPKTDISLYINSPGGS
VTAGLAVYDTMRLIPNDVSTLAMGFAASMGQFLLSVGTHGKRFALPNARIMMHQPSAGIGGTTADIAIQAENLEFTKKTI
ERLTAEHTGQSEETISRDGDRDRWFTAEQAKEYGMVDRVVESLEDVRPAGSKRRIGLGI

Nucleotide

• Length: 660 bp

>NTDB_id=499693 KKZ08_RS24040 WP_223776419.1 5292353..5293012(-) (clpP) [Streptomyces sp. 135]
ATGTCAGTACTCGGCAGTGGCTGGGACGCGGTGGTGCGGCCGCGGGGCGAGGACGGGGACACCGCCCCGTCCCGGTTCGA
CGACCACCTCGCGGCGCAGCTGCTCAACCAGCGGATCGTGTTCCTCGGGACGCAGGTCGACGAGGTGTCCGCCAACCGCG
TCTGCGCGCAGATGCTGCTCCTGTCGGCCGAGGACCCGAAGACCGACATCAGCCTGTACATCAACAGCCCCGGCGGGTCC
GTCACCGCCGGGCTCGCCGTCTACGACACCATGCGGCTCATCCCGAACGACGTCTCCACCCTCGCCATGGGATTCGCCGC
GAGCATGGGGCAGTTCCTGCTGAGCGTCGGGACGCACGGCAAGCGGTTCGCGCTGCCCAACGCGCGGATCATGATGCATC
AGCCGTCGGCCGGCATCGGCGGGACCACCGCCGACATCGCCATCCAGGCGGAGAACCTGGAGTTCACGAAGAAGACCATC
GAGCGGCTCACCGCCGAGCACACCGGGCAGAGCGAGGAGACGATCTCCCGCGACGGGGACCGCGACCGGTGGTTCACCGC
CGAGCAGGCCAAGGAGTACGGGATGGTCGACCGCGTGGTCGAGTCCCTGGAGGACGTGCGGCCCGCCGGGTCGAAGCGGC
GTATCGGGCTCGGGATCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (30-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	48.315	81.279	0.393
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.256	78.539	0.379
clpP	Streptococcus pneumoniae D39	47.977	78.995	0.379
clpP	Streptococcus pneumoniae R6	47.977	78.995	0.379
clpP	Streptococcus pneumoniae TIGR4	47.977	78.995	0.379
clpP	Streptococcus pneumoniae Rx1	47.977	78.995	0.379
clpP	Streptococcus pyogenes JRS4	46.328	80.822	0.374
clpP	Streptococcus pyogenes MGAS315	46.328	80.822	0.374
clpP	Lactococcus lactis subsp. cremoris KW2	46.857	79.909	0.374
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	46.286	79.909	0.37
clpP	Streptococcus mutans UA159	45.198	80.822	0.365
clpP	Streptococcus thermophilus LMG 18311	45.665	78.995	0.361
clpP	Streptococcus thermophilus LMD-9	45.665	78.995	0.361