Detailed information NTG0498237

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: IP614_RS20100
• Genome accession: NZ_CP063975
• Coordinates: 3942674..3943255 (-)
• Length: 193 a.a.
• NCBI ID: WP_000991610.1
• Uniprot ID: A0A9W5QF48
• Organism: Bacillus cereus strain N435-1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3937674..3948255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IP614_RS20070	-	3938296..3938796 (-)	501	WP_178379409.1	HIT family protein	-
IP614_RS20075	-	3938888..3939055 (-)	168	WP_000508470.1	hypothetical protein	-
IP614_RS20080	-	3939273..3939510 (+)	238	Protein_3892	hypothetical protein	-
IP614_RS20085	-	3939564..3940400 (-)	837	WP_001084760.1	proline/glycine betaine ABC transporter permease	-
IP614_RS20090	-	3940393..3941598 (-)	1206	WP_000370606.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
IP614_RS20095	-	3941770..3942627 (+)	858	WP_001227618.1	glycine betaine ABC transporter substrate-binding protein	-
IP614_RS20100	clpP	3942674..3943255 (-)	582	WP_000991610.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
IP614_RS20105	-	3943277..3943963 (-)	687	WP_000337523.1	RNA polymerase subunit sigma-70	-
IP614_RS20110	-	3944106..3944426 (+)	321	WP_001125388.1	2Fe-2S iron-sulfur cluster-binding protein	-
IP614_RS20115	rpiA	3944431..3944961 (+)	531	WP_341475444.1	ribose-5-phosphate isomerase RpiA	-
IP614_RS20120	-	3944985..3946416 (+)	1432	Protein_3900	IS4-like element IS231Q family transposase	-
IP614_RS20125	-	3946542..3946757 (+)	216	Protein_3901	ribose-5-phosphate isomerase A	-
IP614_RS20130	-	3946872..3947306 (+)	435	WP_001190880.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21192.45 Da
• Isoelectric Point: 5.0776

>NTDB_id=498237 IP614_RS20100 WP_000991610.1 3942674..3943255(-) (clpP) [Bacillus cereus strain N435-1]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=498237 IP614_RS20100 WP_000991610.1 3942674..3943255(-) (clpP) [Bacillus cereus strain N435-1]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTGAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATTCTTATACATCAATAGCCCTGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTATTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCTCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCCAAGGCATATGGGATTGTAGA
TGACGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.196	97.927	0.658
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus pneumoniae R6	55.208	99.482	0.549
clpP	Streptococcus pneumoniae TIGR4	55.208	99.482	0.549
clpP	Streptococcus pneumoniae Rx1	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMG 18311	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMD-9	55.208	99.482	0.549
clpP	Streptococcus pneumoniae D39	55.208	99.482	0.549
clpP	Streptococcus mutans UA159	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	52.381	97.927	0.513
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.265	97.927	0.492