Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IM738_RS17435 Genome accession   NZ_CP063400
Coordinates   3680628..3681023 (-) Length   131 a.a.
NCBI ID   WP_236962318.1    Uniprot ID   -
Organism   Hydrogenophaga sp. SL48     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3675628..3686023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IM738_RS17420 (IM738_17410) - 3677323..3679599 (-) 2277 WP_236962315.1 methyl-accepting chemotaxis protein -
  IM738_RS17425 (IM738_17415) - 3679689..3680228 (-) 540 WP_236962316.1 chemotaxis protein CheW -
  IM738_RS17430 (IM738_17420) - 3680263..3680628 (-) 366 WP_236962317.1 response regulator -
  IM738_RS17435 (IM738_17425) pilG 3680628..3681023 (-) 396 WP_236962318.1 response regulator Regulator
  IM738_RS17440 (IM738_17430) - 3681107..3681280 (-) 174 WP_236962319.1 rubredoxin -
  IM738_RS17445 (IM738_17435) - 3681410..3682360 (+) 951 WP_236962320.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  IM738_RS17450 (IM738_17440) hemL 3682389..3683690 (+) 1302 WP_236962321.1 glutamate-1-semialdehyde 2,1-aminomutase -
  IM738_RS17455 (IM738_17445) purH 3684085..3685671 (-) 1587 WP_236962322.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  IM738_RS17460 (IM738_17450) - 3685723..3685962 (-) 240 WP_077334170.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14536.75 Da        Isoelectric Point: 7.1331

>NTDB_id=495434 IM738_RS17435 WP_236962318.1 3680628..3681023(-) (pilG) [Hydrogenophaga sp. SL48]
MNTTPTFKVLVVDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALAKINDYQPDLVFCDILMPRLDGYQTCAIIKRNARFAS
IPVVMLSSKDGVFDKARGRMVGSQEYLTKPFTKDQLLQAVQQFGAHLTGAP

Nucleotide


Download         Length: 396 bp        

>NTDB_id=495434 IM738_RS17435 WP_236962318.1 3680628..3681023(-) (pilG) [Hydrogenophaga sp. SL48]
GTGAACACAACGCCCACTTTCAAAGTCCTGGTGGTGGACGACAGCAACACCATCCGACGCAGCGCCGAGATCTTTCTCAA
GCAGGGTGGGCACGAGGTCCTTCTGGCTGAAGACGGCTTCGATGCCCTGGCCAAGATCAACGATTACCAGCCCGATCTGG
TGTTCTGCGACATCCTGATGCCGCGCCTCGACGGTTACCAGACCTGTGCCATCATCAAGCGCAACGCGCGTTTCGCCAGC
ATTCCTGTGGTGATGCTGTCGTCCAAAGACGGCGTGTTCGACAAGGCGCGTGGGCGCATGGTCGGTTCCCAGGAATACCT
CACCAAACCCTTCACCAAAGACCAGCTGCTGCAAGCCGTGCAACAGTTTGGCGCCCATCTCACAGGAGCCCCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

62.393

89.313

0.557