Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SPYALAB49_RS04840 Genome accession   NC_017596
Coordinates   967200..967388 (-) Length   62 a.a.
NCBI ID   WP_011054546.1    Uniprot ID   A0A5S4TJS4
Organism   Streptococcus pyogenes Alab49     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 962200..972388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYALAB49_RS04820 (SPYALAB49_000979) - 964000..964371 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  SPYALAB49_RS04825 (SPYALAB49_000980) - 964371..965069 (+) 699 WP_002992425.1 ABC transporter ATP-binding protein -
  SPYALAB49_RS04830 (SPYALAB49_000981) - 965079..965864 (+) 786 WP_002984433.1 hypothetical protein -
  SPYALAB49_RS04835 (SPYALAB49_000982) - 965995..966609 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  SPYALAB49_RS04840 (SPYALAB49_000983) prx 967200..967388 (-) 189 WP_011054546.1 hypothetical protein Regulator
  SPYALAB49_RS04845 (SPYALAB49_000984) spel 967503..968291 (-) 789 WP_014635496.1 streptococcal pyrogenic exotoxin SpeL -
  SPYALAB49_RS04850 (SPYALAB49_000985) spem 968573..969286 (-) 714 WP_014635497.1 streptococcal pyrogenic exotoxin SpeM -
  SPYALAB49_RS04855 (SPYALAB49_000986) - 969590..970456 (-) 867 WP_014635498.1 DUF334 domain-containing protein -
  SPYALAB49_RS04860 (SPYALAB49_000987) - 970444..970968 (-) 525 WP_011017840.1 Panacea domain-containing protein -
  SPYALAB49_RS04865 (SPYALAB49_000988) - 971108..971749 (-) 642 Protein_918 CHAP domain-containing protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7226.17 Da        Isoelectric Point: 3.9947

>NTDB_id=49537 SPYALAB49_RS04840 WP_011054546.1 967200..967388(-) (prx) [Streptococcus pyogenes Alab49]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=49537 SPYALAB49_RS04840 WP_011054546.1 967200..967388(-) (prx) [Streptococcus pyogenes Alab49]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS315

84.746

95.161

0.806
  prx Streptococcus pyogenes MGAS8232

84.483

93.548

0.79
  prx Streptococcus pyogenes MGAS315

82.759

93.548

0.774
  prx Streptococcus pyogenes MGAS315

77.966

95.161

0.742
  prx Streptococcus pyogenes MGAS315

87.805

66.129

0.581
  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516

Multiple sequence alignment