Detailed information NTG0494715

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: INQ56_RS16135
• Genome accession: NZ_CP063360
• Coordinates: 3117605..3118201 (+)
• Length: 198 a.a.
• NCBI ID: WP_024719872.1
• Uniprot ID: A0A2G8ISB7
• Organism: Bacillus altitudinis strain BIM B-263
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3112605..3123201

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INQ56_RS16100 (INQ56_16100)	-	3112904..3114061 (-)	1158	WP_163116047.1	toll/interleukin-1 receptor domain-containing protein	-
INQ56_RS16105 (INQ56_16105)	-	3114330..3114467 (-)	138	WP_155761602.1	hypothetical protein	-
INQ56_RS16110 (INQ56_16110)	-	3114691..3115140 (-)	450	WP_163116048.1	protein-export chaperone SecB	-
INQ56_RS16115 (INQ56_16115)	-	3115137..3115454 (-)	318	WP_163116049.1	hypothetical protein	-
INQ56_RS16120 (INQ56_16120)	-	3115484..3116080 (-)	597	WP_163116050.1	hypothetical protein	-
INQ56_RS16125 (INQ56_16125)	-	3116417..3117055 (-)	639	WP_163116051.1	hypothetical protein	-
INQ56_RS16135 (INQ56_16135)	clpP	3117605..3118201 (+)	597	WP_024719872.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
INQ56_RS16140 (INQ56_16140)	-	3118257..3118835 (-)	579	WP_024719873.1	TIGR00730 family Rossman fold protein	-
INQ56_RS16145 (INQ56_16145)	-	3118972..3119313 (+)	342	WP_017368102.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
INQ56_RS16150 (INQ56_16150)	-	3119343..3120965 (-)	1623	WP_193803863.1	SulP family inorganic anion transporter	-
INQ56_RS16155 (INQ56_16155)	-	3121003..3121584 (-)	582	WP_193803865.1	beta-class carbonic anhydrase	-
INQ56_RS16160 (INQ56_16160)	-	3122148..3123125 (+)	978	WP_035701636.1	2-hydroxyacid dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21832.00 Da
• Isoelectric Point: 4.6905

>NTDB_id=494715 INQ56_RS16135 WP_024719872.1 3117605..3118201(+) (clpP) [Bacillus altitudinis strain BIM B-263]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNSEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=494715 INQ56_RS16135 WP_024719872.1 3117605..3118201(+) (clpP) [Bacillus altitudinis strain BIM B-263]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTATCACAGCTTCTTTTCTTAGAAGCCG
AGGATCCAGAAAAAGATATCTCTATCTACATTAACAGCCCTGGCGGTTCGATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAATAGTGAAGTGATGATTCACCAACCACTAGGTGGTGCGCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATTCAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A2G8ISB7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	92.929	100	0.929
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.701	97.98	0.556
clpP	Streptococcus pneumoniae Rx1	56.186	97.98	0.551
clpP	Streptococcus pneumoniae D39	56.186	97.98	0.551
clpP	Streptococcus pneumoniae R6	56.186	97.98	0.551
clpP	Streptococcus pneumoniae TIGR4	56.186	97.98	0.551
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.639	97.98	0.535