Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   SSAL_RS07875 Genome accession   NC_017594
Coordinates   1706098..1707903 (-) Length   601 a.a.
NCBI ID   WP_014633523.1    Uniprot ID   A0AAW7PNL3
Organism   Streptococcus salivarius 57.I     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1701098..1712903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS07860 (Ssal_01733) - 1702682..1703824 (-) 1143 WP_002886735.1 peptidyl-prolyl cis-trans isomerase -
  SSAL_RS07865 (Ssal_01734) - 1703886..1704593 (-) 708 WP_002886734.1 O-methyltransferase -
  SSAL_RS07870 (Ssal_01735) - 1704665..1705885 (-) 1221 WP_014633522.1 OFA family MFS transporter -
  SSAL_RS07875 (Ssal_01736) pepF 1706098..1707903 (-) 1806 WP_014633523.1 oligoendopeptidase F Regulator
  SSAL_RS07880 (Ssal_01737) - 1707914..1708873 (-) 960 WP_014633524.1 competence protein CoiA family protein -
  SSAL_RS07885 - 1710197..1711178 (+) 982 Protein_1551 IS3 family transposase -
  SSAL_RS07890 (Ssal_01740) - 1711505..1712344 (-) 840 WP_002886729.1 CHAP domain-containing protein -

Sequence

Protein


Download         Length: 601 a.a.        Molecular weight: 69068.13 Da        Isoelectric Point: 4.5615

>NTDB_id=49416 SSAL_RS07875 WP_014633523.1 1706098..1707903(-) (pepF) [Streptococcus salivarius 57.I]
MSDNRAHLEEKYTWDLTTIFATDADWETEYESTVQDLKKASAYAGHLLDSAKNLLEATELYMSLMRRLEKIYVYASMKND
QDTTVGLYQEYQAKASNLYSQLSEAFAYFEPEFMALDDKKLAEFKEQEPGLGLYDHYFERLLANKDHVLSQEAEELLAAA
GDIFNGPTDTFNVLDNADILFPWVSDGQGDVVELTHGNFITLMESKDRDIRKGAYEAMYGTYEQFQHTYAQTLQGVVKVH
NYQAKVRHYNSARHAALAANFIPESVYDSLLESVNKHLPLLHRYLDLRKKVLGLDELKMYDVYTPLSETETALTYEESLK
KAEEVLAIFGEEYSKGVHAAFTERWIDVHPNKGKRSGAYSGGAYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTRQT
QPYVYGDYPIFLAEIASTTNENILTETLLKEVKDDKTRFAILNHYLDGFKGTVFRQTQFAEFEHAIHEADASGQILTADF
MNKLYADLNEKYYNLKAEDNYEIQFEWERIPHFYMNYYVYQYATGFAAASYLAEKIVHGTEEDKEAYLTYLKAGSSDYPL
EVIKKAGVDMTNTDYLDAAFKVFEDRLVELEVLVEKGVHLS

Nucleotide


Download         Length: 1806 bp        

>NTDB_id=49416 SSAL_RS07875 WP_014633523.1 1706098..1707903(-) (pepF) [Streptococcus salivarius 57.I]
ATGTCAGACAATCGTGCTCATTTAGAAGAGAAATACACATGGGATTTGACGACCATTTTTGCGACAGATGCAGATTGGGA
GACTGAATATGAAAGCACTGTTCAGGATTTGAAGAAGGCTAGTGCTTATGCAGGTCATCTCTTAGATTCTGCTAAGAACT
TGCTTGAGGCAACTGAACTTTATATGAGTCTTATGCGTCGCTTGGAGAAAATCTATGTCTATGCGTCAATGAAAAATGAC
CAAGACACAACAGTAGGTCTTTACCAAGAGTACCAAGCTAAGGCCTCAAACCTTTACTCACAGTTGAGTGAAGCCTTTGC
TTACTTTGAGCCTGAATTTATGGCCTTGGATGATAAGAAATTAGCTGAATTTAAAGAACAAGAGCCAGGTCTTGGACTTT
ATGATCACTATTTCGAACGTCTTTTGGCAAACAAGGACCACGTTCTTTCTCAAGAAGCTGAAGAGCTCTTGGCAGCAGCC
GGTGATATTTTCAACGGCCCAACGGATACCTTCAATGTCTTGGATAATGCTGATATCCTCTTCCCATGGGTATCAGATGG
TCAAGGGGATGTGGTTGAGTTGACACATGGTAACTTTATCACTCTCATGGAATCTAAGGACCGTGACATTCGTAAGGGAG
CTTATGAAGCGATGTACGGTACTTATGAGCAGTTCCAACATACTTATGCACAAACACTCCAAGGCGTTGTCAAGGTTCAC
AATTACCAAGCCAAAGTTCGTCACTATAATTCAGCACGTCATGCAGCACTTGCGGCTAACTTTATTCCAGAGAGTGTTTA
TGACTCACTCTTGGAATCAGTGAACAAGCATTTGCCACTTTTGCATCGTTACCTTGATTTGCGTAAGAAGGTCTTGGGGC
TTGACGAGCTTAAGATGTATGACGTCTATACACCACTTTCTGAGACTGAAACTGCTCTTACTTATGAAGAATCCCTCAAG
AAAGCAGAAGAAGTCTTGGCAATCTTTGGTGAAGAGTATAGTAAAGGGGTTCATGCAGCCTTTACGGAACGTTGGATTGA
CGTTCACCCTAACAAAGGAAAACGTTCAGGTGCCTACTCAGGTGGTGCTTATGATACCAATGCCTTCATGCTTTTGAACT
GGCAAGATACTTTGGACAATCTCTTTACCTTGGTTCACGAGACTGGCCACAGTTTGCATTCAACGTTCACACGGCAGACT
CAACCATATGTTTACGGAGATTACCCAATCTTCTTGGCGGAAATTGCGTCTACAACCAATGAAAATATCTTGACAGAAAC
GCTTCTTAAAGAGGTCAAAGATGACAAGACACGTTTTGCTATTCTTAACCACTATCTGGATGGTTTCAAGGGAACTGTCT
TCCGTCAAACACAATTTGCCGAGTTTGAACATGCTATTCATGAGGCAGATGCATCTGGTCAAATCTTGACAGCGGACTTC
ATGAATAAGCTTTACGCAGACCTCAATGAGAAATACTATAACCTTAAAGCTGAAGATAACTACGAAATTCAGTTTGAGTG
GGAACGTATTCCGCATTTCTACATGAACTACTATGTCTACCAATACGCTACAGGATTTGCTGCGGCAAGCTACTTGGCTG
AAAAAATTGTTCACGGTACTGAAGAAGATAAAGAAGCTTACCTTACTTACCTTAAGGCAGGAAGCTCAGACTATCCTTTG
GAAGTCATCAAGAAAGCTGGTGTTGATATGACCAATACCGACTACTTAGATGCTGCCTTCAAAGTTTTTGAAGACCGTCT
CGTTGAATTGGAAGTCTTGGTTGAAAAAGGTGTTCACCTTTCGTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

99.501

100

0.995

Multiple sequence alignment