Detailed information NTG0493602

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: IMZ24_RS17045
• Genome accession: NZ_CP063157
• Coordinates: 3476744..3477892 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GY65
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3471744..3482892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IMZ24_RS17015 (IMZ24_17015)	-	3471880..3472638 (-)	759	WP_007609404.1	ABC transporter ATP-binding protein	-
IMZ24_RS17020 (IMZ24_17020)	-	3472632..3473579 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
IMZ24_RS17025 (IMZ24_17025)	ceuB	3473569..3474522 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
IMZ24_RS17030 (IMZ24_17030)	-	3474936..3476300 (+)	1365	WP_007609394.1	aspartate kinase	-
IMZ24_RS17035 (IMZ24_17035)	-	3476380..3476490 (+)	111	WP_369878517.1	YjcZ family sporulation protein	-
IMZ24_RS17040 (IMZ24_17040)	phrC	3476641..3476760 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
IMZ24_RS17045 (IMZ24_17045)	rapC	3476744..3477892 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
IMZ24_RS17050 (IMZ24_17050)	-	3478045..3479478 (-)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
IMZ24_RS17055 (IMZ24_17055)	-	3479465..3480148 (-)	684	WP_032872879.1	response regulator transcription factor	-
IMZ24_RS17060 (IMZ24_17060)	-	3480361..3481791 (+)	1431	WP_032872876.1	ABC transporter permease	-
IMZ24_RS17065 (IMZ24_17065)	-	3481806..3482489 (+)	684	WP_032872874.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=493602 IMZ24_RS17045 WP_007410270.1 3476744..3477892(-) (rapC) [Bacillus velezensis strain GY65]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=493602 IMZ24_RS17045 WP_007410270.1 3476744..3477892(-) (rapC) [Bacillus velezensis strain GY65]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568