Detailed information NTG0049068

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: SESEC_RS08390
• Genome accession: NC_017582
• Coordinates: 1776447..1777037 (-)
• Length: 196 a.a.
• NCBI ID: WP_038674015.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus ATCC 35246
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1771447..1782037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SESEC_RS08355 (SeseC_02151)	rsmI	1771799..1772665 (-)	867	WP_012516194.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
SESEC_RS08360 (SeseC_02152)	yabA	1772670..1772993 (-)	324	WP_012516195.1	DNA replication initiation control protein YabA	-
SESEC_RS08365 (SeseC_02155)	ricT	1772986..1773786 (-)	801	WP_038674020.1	regulatory iron-sulfur-containing complex subunit RicT	-
SESEC_RS08370 (SeseC_02156)	-	1773783..1774658 (-)	876	WP_014623394.1	DNA polymerase III subunit delta'	-
SESEC_RS08375 (SeseC_02157)	tmk	1774672..1775307 (-)	636	WP_012680032.1	dTMP kinase	-
SESEC_RS08380 (SeseC_02160)	-	1775627..1775905 (-)	279	WP_014623396.1	YlbG family protein	-
SESEC_RS08385 (SeseC_02161)	-	1775906..1776352 (-)	447	WP_014623397.1	YlbF family regulator	-
SESEC_RS08390 (SeseC_02162)	clpP	1776447..1777037 (-)	591	WP_038674015.1	ATP-dependent Clp protease proteolytic subunit	Regulator
SESEC_RS08395 (SeseC_02164)	upp	1777269..1777898 (-)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
SESEC_RS08400 (SeseC_02165)	-	1778048..1779679 (-)	1632	WP_014623399.1	putative polysaccharide biosynthesis protein	-
SESEC_RS08405 (SeseC_02166)	-	1779765..1781210 (+)	1446	WP_014623400.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21577.80 Da
• Isoelectric Point: 5.0281

>NTDB_id=49068 SESEC_RS08390 WP_038674015.1 1776447..1777037(-) (clpP) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGLVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=49068 SESEC_RS08390 WP_038674015.1 1776447..1777037(-) (clpP) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGTTGACTGGTCTAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGATATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTTTAGCTATTGTTGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCTTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAATATATGATTCACCAGCCTATGGGAGGTACAGGAGGTGGTACGCAGCAGA
CGGATATGGCCATTGCTGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTACTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	98.974	99.49	0.985
clpP	Streptococcus pyogenes JRS4	98.974	99.49	0.985
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus mutans UA159	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	88.718	99.49	0.883
clpP	Streptococcus thermophilus LMD-9	88.718	99.49	0.883
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.128	99.49	0.847
clpP	Lactococcus lactis subsp. cremoris KW2	84.615	99.49	0.842
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566