Detailed information NTG0490574

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: KE639_RS02620
• Genome accession: NZ_CP074111
• Coordinates: 549635..550288 (+)
• Length: 217 a.a.
• NCBI ID: WP_186779568.1
• Uniprot ID: -
• Organism: Streptomyces sp. V17-9
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 544635..555288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KE639_RS02595 (KE639_00519)	-	544999..545982 (-)	984	WP_102932141.1	aldo/keto reductase	-
KE639_RS02600 (KE639_00520)	-	545995..547272 (-)	1278	WP_249338431.1	FAD-dependent monooxygenase	-
KE639_RS02605 (KE639_00521)	-	547354..548052 (-)	699	WP_212729237.1	ribonuclease H	-
KE639_RS02610 (KE639_00522)	-	548084..548881 (-)	798	WP_165286626.1	VOC family protein	-
KE639_RS02615 (KE639_00523)	-	548933..549415 (-)	483	WP_125634134.1	VOC family protein	-
KE639_RS02620 (KE639_00524)	clpP	549635..550288 (+)	654	WP_186779568.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KE639_RS02625 (KE639_00525)	clpP	550290..550892 (+)	603	WP_061446291.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KE639_RS02630	-	550953..551387 (-)	435	WP_165286625.1	helix-turn-helix transcriptional regulator	-
KE639_RS02635 (KE639_00527)	-	551615..552469 (+)	855	WP_102932147.1	RNA polymerase sigma factor SigF	-
KE639_RS02640 (KE639_00528)	-	552503..552958 (-)	456	WP_102932148.1	ATP-binding protein	-
KE639_RS02645 (KE639_00529)	-	553126..553710 (+)	585	WP_212729238.1	PRC-barrel domain-containing protein	-
KE639_RS02650 (KE639_00530)	-	553707..554126 (+)	420	WP_212729239.1	PRC-barrel domain-containing protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 23493.54 Da
• Isoelectric Point: 4.9033

>NTDB_id=490574 KE639_RS02620 WP_186779568.1 549635..550288(+) (clpP) [Streptomyces sp. V17-9]
MSPLIAGPAPAAPPRAEDGDTPATRFDDRLAEQLLDQRIVLLGTQVDEVSANRVCAQLLILSAQDPRTDISLYVNSPGGS
VHAGLAIYDTMRLIPNDVSTLAMGFAASMGQFLLSVGTAGKRYALPNSRIMMHQPSAGIGGTTADIEIQADNLEFTKRTI
ERITAEHTGQSPETISRDGDRDRWFTAEEAREYGMVDRVVQSLADVRPAATRRRMGL

Nucleotide

• Length: 654 bp

>NTDB_id=490574 KE639_RS02620 WP_186779568.1 549635..550288(+) (clpP) [Streptomyces sp. V17-9]
ATGTCTCCACTCATCGCAGGCCCCGCCCCCGCCGCACCGCCCAGGGCCGAGGACGGCGACACCCCCGCGACCCGTTTCGA
CGACCGGCTCGCCGAGCAGTTGCTGGACCAGCGGATCGTGCTGCTGGGCACCCAGGTGGACGAGGTCTCCGCGAACCGGG
TCTGCGCCCAGCTGCTGATCCTGTCCGCGCAGGATCCGCGCACCGACATCAGCCTGTACGTCAACAGCCCCGGCGGTTCC
GTGCACGCGGGGCTCGCCATCTACGACACCATGCGGCTGATCCCCAACGACGTCTCGACGCTCGCCATGGGGTTCGCCGC
CAGCATGGGGCAGTTCCTGCTGAGCGTCGGCACGGCGGGCAAGCGCTACGCCCTGCCGAACTCGCGGATCATGATGCACC
AGCCGTCGGCGGGCATCGGCGGCACCACGGCGGACATCGAGATCCAGGCGGACAACCTGGAGTTCACCAAGCGGACGATC
GAGCGGATCACCGCCGAGCACACCGGGCAGAGCCCGGAGACCATCTCCCGGGACGGCGACCGCGACCGCTGGTTCACGGC
CGAGGAGGCCAGGGAGTACGGAATGGTGGACCGGGTCGTGCAGTCCCTCGCGGACGTGCGCCCGGCCGCCACCCGGCGAC
GGATGGGGCTGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (30-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50.286	80.645	0.406
clpP	Streptococcus pneumoniae Rx1	50	78.341	0.392
clpP	Streptococcus pneumoniae D39	50	78.341	0.392
clpP	Streptococcus pneumoniae R6	50	78.341	0.392
clpP	Streptococcus pneumoniae TIGR4	50	78.341	0.392
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.977	79.724	0.382
clpP	Lactococcus lactis subsp. cremoris KW2	46.857	80.645	0.378
clpP	Streptococcus pyogenes JRS4	47.674	79.263	0.378
clpP	Streptococcus pyogenes MGAS315	47.674	79.263	0.378
clpP	Streptococcus thermophilus LMG 18311	46.821	79.724	0.373
clpP	Streptococcus thermophilus LMD-9	46.821	79.724	0.373
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	47.093	79.263	0.373