Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | IF718_RS13445 | Genome accession | NZ_CP062417 |
| Coordinates | 2727775..2728245 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934762.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NAS_AN_143 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2722775..2733245
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF718_RS13405 (IF718_13325) | - | 2722813..2723040 (-) | 228 | WP_000801108.1 | hypothetical protein | - |
| IF718_RS13410 (IF718_13330) | - | 2723099..2723419 (+) | 321 | WP_001120935.1 | DUF771 domain-containing protein | - |
| IF718_RS13415 (IF718_13335) | - | 2723416..2723577 (+) | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| IF718_RS13420 (IF718_13340) | - | 2723670..2723930 (+) | 261 | WP_000291489.1 | DUF1108 family protein | - |
| IF718_RS13425 (IF718_13345) | - | 2723939..2724202 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| IF718_RS13430 (IF718_13350) | - | 2724199..2726154 (+) | 1956 | WP_048519603.1 | AAA family ATPase | - |
| IF718_RS13435 (IF718_13355) | - | 2726156..2727076 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| IF718_RS13440 (IF718_13360) | - | 2727157..2727774 (+) | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| IF718_RS13445 (IF718_13365) | ssbA | 2727775..2728245 (+) | 471 | WP_000934762.1 | single-stranded DNA-binding protein | Machinery gene |
| IF718_RS13450 (IF718_13370) | - | 2728275..2729168 (+) | 894 | WP_000148327.1 | DnaD domain-containing protein | - |
| IF718_RS13455 (IF718_13375) | - | 2729175..2729393 (+) | 219 | WP_000338527.1 | hypothetical protein | - |
| IF718_RS13460 (IF718_13380) | - | 2729402..2729857 (+) | 456 | WP_000401965.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IF718_RS13465 (IF718_13385) | - | 2729870..2730238 (+) | 369 | WP_000101270.1 | SA1788 family PVL leukocidin-associated protein | - |
| IF718_RS13470 (IF718_13390) | - | 2730242..2730484 (+) | 243 | WP_000131381.1 | phi PVL orf 51-like protein | - |
| IF718_RS13475 (IF718_13395) | - | 2730499..2730750 (+) | 252 | WP_001065046.1 | DUF1024 family protein | - |
| IF718_RS13480 (IF718_13400) | - | 2730740..2730913 (+) | 174 | WP_000028424.1 | hypothetical protein | - |
| IF718_RS13485 (IF718_13405) | - | 2731002..2731196 (+) | 195 | WP_231119680.1 | hypothetical protein | - |
| IF718_RS13490 (IF718_13410) | - | 2731197..2731358 (+) | 162 | WP_000889682.1 | hypothetical protein | - |
| IF718_RS13495 (IF718_13415) | - | 2731373..2731906 (+) | 534 | WP_001061838.1 | dUTPase | - |
| IF718_RS13500 (IF718_13420) | - | 2731943..2732188 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| IF718_RS13505 (IF718_13425) | - | 2732185..2732391 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| IF718_RS13510 (IF718_13430) | - | 2732388..2732774 (+) | 387 | WP_000592201.1 | hypothetical protein | - |
| IF718_RS13515 (IF718_13435) | - | 2732771..2732920 (+) | 150 | WP_000595305.1 | transcriptional activator RinB | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17673.58 Da Isoelectric Point: 5.2670
>NTDB_id=489974 IF718_RS13445 WP_000934762.1 2727775..2728245(+) (ssbA) [Staphylococcus aureus strain NAS_AN_143]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANCPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANCPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=489974 IF718_RS13445 WP_000934762.1 2727775..2728245(+) (ssbA) [Staphylococcus aureus strain NAS_AN_143]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTAAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATTGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTAAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATTGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Vibrio cholerae strain A1552 |
31.492 |
100 |
0.365 |
| ssb | Neisseria meningitidis MC58 |
32.948 |
100 |
0.365 |
| ssb | Neisseria gonorrhoeae MS11 |
32.948 |
100 |
0.365 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |