Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | IF734_RS13445 | Genome accession | NZ_CP062409 |
| Coordinates | 2727980..2728450 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934762.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NAS_AN_239 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2722980..2733450
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF734_RS13405 (IF734_13330) | - | 2723018..2723245 (-) | 228 | WP_000801108.1 | hypothetical protein | - |
| IF734_RS13410 (IF734_13335) | - | 2723304..2723624 (+) | 321 | WP_001120935.1 | DUF771 domain-containing protein | - |
| IF734_RS13415 (IF734_13340) | - | 2723621..2723782 (+) | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| IF734_RS13420 (IF734_13345) | - | 2723875..2724135 (+) | 261 | WP_000291489.1 | DUF1108 family protein | - |
| IF734_RS13425 (IF734_13350) | - | 2724144..2724407 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| IF734_RS13430 (IF734_13355) | - | 2724404..2726359 (+) | 1956 | WP_048519603.1 | AAA family ATPase | - |
| IF734_RS13435 (IF734_13360) | - | 2726361..2727281 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| IF734_RS13440 (IF734_13365) | - | 2727362..2727979 (+) | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| IF734_RS13445 (IF734_13370) | ssbA | 2727980..2728450 (+) | 471 | WP_000934762.1 | single-stranded DNA-binding protein | Machinery gene |
| IF734_RS13450 (IF734_13375) | - | 2728480..2729373 (+) | 894 | WP_000148327.1 | DnaD domain-containing protein | - |
| IF734_RS13455 (IF734_13380) | - | 2729380..2729598 (+) | 219 | WP_000338527.1 | hypothetical protein | - |
| IF734_RS13460 (IF734_13385) | - | 2729607..2730062 (+) | 456 | WP_000401965.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IF734_RS13465 (IF734_13390) | - | 2730075..2730443 (+) | 369 | WP_000101270.1 | SA1788 family PVL leukocidin-associated protein | - |
| IF734_RS13470 (IF734_13395) | - | 2730447..2730689 (+) | 243 | WP_000131381.1 | phi PVL orf 51-like protein | - |
| IF734_RS13475 (IF734_13400) | - | 2730704..2730955 (+) | 252 | WP_001065046.1 | DUF1024 family protein | - |
| IF734_RS13480 (IF734_13405) | - | 2730945..2731118 (+) | 174 | WP_000028424.1 | hypothetical protein | - |
| IF734_RS13485 (IF734_13410) | - | 2731207..2731401 (+) | 195 | WP_231119680.1 | hypothetical protein | - |
| IF734_RS13490 (IF734_13415) | - | 2731402..2731563 (+) | 162 | WP_000889682.1 | hypothetical protein | - |
| IF734_RS13495 (IF734_13420) | - | 2731578..2732111 (+) | 534 | WP_001061838.1 | dUTPase | - |
| IF734_RS13500 (IF734_13425) | - | 2732148..2732393 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| IF734_RS13505 (IF734_13430) | - | 2732390..2732596 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| IF734_RS13510 (IF734_13435) | - | 2732593..2732979 (+) | 387 | WP_000592201.1 | hypothetical protein | - |
| IF734_RS13515 (IF734_13440) | - | 2732976..2733125 (+) | 150 | WP_000595305.1 | transcriptional activator RinB | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17673.58 Da Isoelectric Point: 5.2670
>NTDB_id=489635 IF734_RS13445 WP_000934762.1 2727980..2728450(+) (ssbA) [Staphylococcus aureus strain NAS_AN_239]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANCPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANCPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=489635 IF734_RS13445 WP_000934762.1 2727980..2728450(+) (ssbA) [Staphylococcus aureus strain NAS_AN_239]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTAAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATTGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTAAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATTGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Vibrio cholerae strain A1552 |
31.492 |
100 |
0.365 |
| ssb | Neisseria meningitidis MC58 |
32.948 |
100 |
0.365 |
| ssb | Neisseria gonorrhoeae MS11 |
32.948 |
100 |
0.365 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |