Detailed information NTG0487209

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: KDH82_RS02505
• Genome accession: NZ_CP073350
• Coordinates: 553955..554623 (-)
• Length: 222 a.a.
• NCBI ID: WP_097561159.1
• Uniprot ID: -
• Organism: Porphyromonas gingivalis strain LyG-2
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 548955..559623

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KDH82_RS02490 (KDH82_02490)	-	549008..550390 (-)	1383	WP_010956007.1	peptidylprolyl isomerase	-
KDH82_RS02495 (KDH82_02495)	recQ	550427..552604 (-)	2178	WP_004584941.1	DNA helicase RecQ	-
KDH82_RS02500 (KDH82_02500)	clpX	552683..553918 (-)	1236	WP_005873798.1	ATP-dependent Clp protease ATP-binding subunit ClpX	-
KDH82_RS02505 (KDH82_02505)	clpP	553955..554623 (-)	669	WP_097561159.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
KDH82_RS02510 (KDH82_02510)	-	554996..555856 (-)	861	WP_211600131.1	head GIN domain-containing protein	-
KDH82_RS02515 (KDH82_02515)	-	556128..556985 (-)	858	WP_077084457.1	head GIN domain-containing protein	-
KDH82_RS02520 (KDH82_02520)	-	557150..557428 (+)	279	WP_211600133.1	hypothetical protein	-
KDH82_RS02525 (KDH82_02525)	-	557491..557835 (+)	345	WP_004584948.1	hypothetical protein	-
KDH82_RS02530 (KDH82_02530)	-	557816..558475 (+)	660	WP_012458361.1	YiiX/YebB-like N1pC/P60 family cysteine hydrolase	-
KDH82_RS02535 (KDH82_02535)	-	558511..559350 (-)	840	WP_211600135.1	alpha/beta hydrolase family protein	-

Sequence

Protein

• Length: 222 a.a.
• Molecular weight: 24832.50 Da
• Isoelectric Point: 5.6830

>NTDB_id=487209 KDH82_RS02505 WP_097561159.1 553955..554623(-) (clpP) [Porphyromonas gingivalis strain LyG-2]
MNEFKKYATRHIGLNAQVLDDYTRIQSSYISPTIIEERQLNVAQMDVFSRLMMDRIIFLGTQIDDYTANVIQAQLLYLDS
ADPGKDISIYLNSPGGSVYAGYGIYDTMQYIGCDVATICTGMAASMASVLLVAGTKGKRFALPHSRVMIHQPLGGMQGQA
SDLEIAAREILRVKKELYTIISSHSGKPVEQVEKDSDRDYWMTAPEALEYGMIDKILEKNRK

Nucleotide

• Length: 669 bp

>NTDB_id=487209 KDH82_RS02505 WP_097561159.1 553955..554623(-) (clpP) [Porphyromonas gingivalis strain LyG-2]
ATGAACGAATTCAAAAAATACGCGACCCGACATATCGGGTTGAATGCACAGGTCTTGGACGACTATACCAGAATCCAAAG
CAGCTACATCTCTCCGACCATTATCGAAGAACGCCAGTTGAACGTTGCACAAATGGACGTATTCTCACGTCTAATGATGG
ATCGGATCATCTTCCTTGGCACTCAGATCGACGATTACACGGCCAATGTCATTCAAGCACAGCTTCTTTACCTCGATAGC
GCCGACCCCGGTAAAGATATTTCCATCTATCTGAATTCACCCGGCGGATCTGTTTATGCCGGTTATGGCATATACGATAC
GATGCAGTATATAGGGTGCGATGTGGCCACTATCTGTACGGGCATGGCCGCGTCTATGGCATCAGTGCTGCTCGTAGCAG
GAACGAAAGGCAAACGCTTTGCTTTGCCTCATTCCCGCGTGATGATACATCAGCCACTTGGTGGTATGCAGGGGCAGGCC
AGCGATTTGGAGATCGCAGCTCGCGAGATTCTTCGCGTCAAGAAAGAGCTTTACACGATTATCTCTTCTCACAGTGGAAA
GCCCGTCGAGCAGGTCGAAAAAGATAGTGATCGGGACTATTGGATGACAGCCCCCGAAGCATTGGAGTACGGGATGATAG
ATAAAATCCTCGAAAAGAATCGAAAGTAG

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (44-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	57.527	83.784	0.482
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.927	86.036	0.464
clpP	Lactococcus lactis subsp. cremoris KW2	50	87.387	0.437
clpP	Streptococcus mutans UA159	49.738	86.036	0.428
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	48.454	87.387	0.423
clpP	Streptococcus thermophilus LMG 18311	48.958	86.486	0.423
clpP	Streptococcus thermophilus LMD-9	48.958	86.486	0.423
clpP	Streptococcus pyogenes MGAS315	48.691	86.036	0.419
clpP	Streptococcus pyogenes JRS4	48.691	86.036	0.419
clpP	Streptococcus pneumoniae Rx1	47.644	86.036	0.41
clpP	Streptococcus pneumoniae D39	47.644	86.036	0.41
clpP	Streptococcus pneumoniae R6	47.644	86.036	0.41
clpP	Streptococcus pneumoniae TIGR4	47.644	86.036	0.41