Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   J7U34_RS04945 Genome accession   NZ_CP072778
Coordinates   947316..947474 (+) Length   52 a.a.
NCBI ID   WP_014608276.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24748     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 942316..952474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U34_RS04925 (J7U34_04900) - 942896..944554 (-) 1659 WP_014608275.1 NFACT family protein -
  J7U34_RS04930 (J7U34_04905) - 944877..945833 (+) 957 WP_014727508.1 hypothetical protein -
  J7U34_RS04935 (J7U34_04910) - 946139..946624 (+) 486 WP_014607832.1 NUDIX hydrolase -
  J7U34_RS04940 (J7U34_04915) - 946628..946819 (+) 192 WP_011681104.1 hypothetical protein -
  J7U34_RS04945 (J7U34_04920) prx 947316..947474 (+) 159 WP_014608276.1 hypothetical protein Regulator
  J7U34_RS04950 (J7U34_04925) - 947676..948344 (+) 669 WP_014621543.1 TraX family protein -
  J7U34_RS04955 (J7U34_04930) - 948348..948569 (+) 222 WP_224102972.1 conjugal transfer protein TraX -
  J7U34_RS04960 (J7U34_04935) - 948611..949159 (+) 549 WP_014608278.1 DJ-1 family glyoxalase III -
  J7U34_RS04965 (J7U34_04940) - 949216..949431 (-) 216 WP_011681107.1 hypothetical protein -
  J7U34_RS04970 (J7U34_04945) - 949430..950203 (+) 774 WP_011681108.1 dihydroorotate dehydrogenase electron transfer subunit -
  J7U34_RS04975 (J7U34_04950) - 950222..951169 (+) 948 WP_024704100.1 dihydroorotate dehydrogenase -
  J7U34_RS04980 (J7U34_04955) cas1 951308..952312 (+) 1005 WP_014727507.1 CRISPR-associated endonuclease Cas1 -

Sequence

Protein


Download         Length: 52 a.a.        Molecular weight: 5835.59 Da        Isoelectric Point: 4.6646

>NTDB_id=484804 J7U34_RS04945 WP_014608276.1 947316..947474(+) (prx) [Streptococcus thermophilus strain S24748]
MDNGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILSLEKVSDIIKELGGDN

Nucleotide


Download         Length: 159 bp        

>NTDB_id=484804 J7U34_RS04945 WP_014608276.1 947316..947474(+) (prx) [Streptococcus thermophilus strain S24748]
ATGGACAACGGTTTTATTAAAGGTGATACTGTCCAGATTGTCCGAAAGAATGGTAAGATCCATGACTACGTTTTAGACGG
TGAACGAGTTGAGCCACACGAAATATTGAGCTTAGAAAAGGTATCGGATATAATAAAAGAACTAGGCGGAGACAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

54.167

92.308

0.5
  prx Streptococcus pyogenes MGAS8232

53.061

94.231

0.5
  prx Streptococcus pyogenes MGAS315

51.02

94.231

0.481
  prx Streptococcus pyogenes MGAS315

50

92.308

0.462
  prx Streptococcus pyogenes MGAS315

71.875

61.538

0.442
  prx Streptococcus pyogenes MGAS315

61.765

65.385

0.404
  prx Streptococcus pyogenes MGAS315

70

57.692

0.404