Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   J5Z97_RS05355 Genome accession   NZ_CP072112
Coordinates   1052993..1053181 (-) Length   62 a.a.
NCBI ID   WP_002993136.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M08500     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1047993..1058181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5Z97_RS05330 (J5Z97_05330) - 1049797..1050168 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  J5Z97_RS05335 (J5Z97_05335) - 1050168..1050866 (+) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  J5Z97_RS05340 (J5Z97_05340) - 1050876..1051661 (+) 786 WP_011017835.1 hypothetical protein -
  J5Z97_RS05345 (J5Z97_05345) - 1051788..1052402 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  J5Z97_RS05355 (J5Z97_05355) prx 1052993..1053181 (-) 189 WP_002993136.1 hypothetical protein Regulator
  J5Z97_RS05360 (J5Z97_05360) sda3 1053419..1054219 (+) 801 WP_162472510.1 streptodornase Sda3 -
  J5Z97_RS05365 (J5Z97_05365) - 1054491..1054925 (+) 435 WP_136019430.1 hypothetical protein -
  J5Z97_RS05370 (J5Z97_05370) - 1054998..1056332 (-) 1335 WP_208769240.1 GH25 family lysozyme -
  J5Z97_RS05375 (J5Z97_05375) - 1056444..1056629 (-) 186 WP_002990010.1 holin -
  J5Z97_RS05380 (J5Z97_05380) - 1056626..1056922 (-) 297 WP_002990012.1 hypothetical protein -
  J5Z97_RS05385 (J5Z97_05385) - 1056932..1057564 (-) 633 WP_129796151.1 hypothetical protein -
  J5Z97_RS05390 (J5Z97_05390) - 1057567..1057995 (-) 429 WP_002988448.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7239.28 Da        Isoelectric Point: 3.9944

>NTDB_id=480549 J5Z97_RS05355 WP_002993136.1 1052993..1053181(-) (prx) [Streptococcus pyogenes strain M08500]
MLTYDEFKQAIDNGYITGDTVIIVRKNGQIFDYVLPGEKVRPWEVVTEEVVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=480549 J5Z97_RS05355 WP_002993136.1 1052993..1053181(-) (prx) [Streptococcus pyogenes strain M08500]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAACGGATATATCACAGGAGACACAGTAATAATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGCCTGGTGAGAAAGTCAGACCATGGGAGGTTGTGACCGAGGAGGTAGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85.484

100

0.855
  prx Streptococcus pyogenes MGAS8232

82.759

93.548

0.774
  prx Streptococcus pyogenes MGAS315

81.356

95.161

0.774
  prx Streptococcus pyogenes MGAS315

81.356

95.161

0.774
  prx Streptococcus pyogenes MGAS315

79.31

93.548

0.742
  prx Streptococcus pyogenes MGAS315

95.238

67.742

0.645
  prx Streptococcus pyogenes MGAS315

80.488

66.129

0.532