Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   H7790_RS01750 Genome accession   NZ_CP060645
Coordinates   324683..325234 (+) Length   183 a.a.
NCBI ID   WP_111688228.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1349     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 319683..330234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7790_RS01750 (H7790_01760) comX/sigX/comX2/sigX2 324683..325234 (+) 552 WP_111688228.1 sigma-70 family RNA polymerase sigma factor Regulator
  H7790_RS01755 (H7790_01765) - 325793..326320 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  H7790_RS01760 (H7790_01770) yqeH 326320..327438 (+) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  H7790_RS01765 (H7790_01775) yhbY 327463..327771 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  H7790_RS01770 (H7790_01780) - 327840..328472 (+) 633 WP_014407306.1 nicotinate-nucleotide adenylyltransferase -
  H7790_RS01775 (H7790_01785) yqeK 328469..329062 (+) 594 WP_115230684.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  H7790_RS01780 (H7790_01790) rsfS 329086..329439 (+) 354 WP_015055915.1 ribosome silencing factor -
  H7790_RS01785 (H7790_01795) - 329487..330230 (+) 744 WP_014407307.1 class I SAM-dependent DNA methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22307.16 Da        Isoelectric Point: 10.0375

>NTDB_id=477299 H7790_RS01750 WP_111688228.1 324683..325234(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY1349]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNLQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=477299 H7790_RS01750 WP_111688228.1 324683..325234(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY1349]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTTGCAAGAGCGTATGCAATTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAAGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.