Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   H7790_RS00425 Genome accession   NZ_CP060645
Coordinates   68628..68810 (+) Length   60 a.a.
NCBI ID   WP_011054856.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1349     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 63628..73810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7790_RS00400 (H7790_00405) - 64061..64516 (+) 456 WP_002988455.1 phage holin family protein -
  H7790_RS09350 - 64518..64640 (+) 123 WP_027968869.1 hypothetical protein -
  H7790_RS00405 (H7790_00410) - 64628..65824 (+) 1197 WP_094751270.1 glucosaminidase domain-containing protein -
  H7790_RS00410 (H7790_00415) - 65961..66503 (+) 543 WP_048327805.1 Panacea domain-containing protein -
  H7790_RS00415 (H7790_00420) - 66507..67343 (+) 837 WP_094751269.1 hypothetical protein -
  H7790_RS00420 (H7790_00425) - 67406..68395 (-) 990 WP_050443212.1 DNA/RNA non-specific endonuclease -
  H7790_RS00425 (H7790_00430) prx 68628..68810 (+) 183 WP_011054856.1 hypothetical protein Regulator
  H7790_RS00430 (H7790_00435) plsX 69049..70056 (+) 1008 WP_002987696.1 phosphate acyltransferase PlsX -
  H7790_RS00435 (H7790_00440) - 70049..70291 (+) 243 WP_014407187.1 phosphopantetheine-binding protein -
  H7790_RS00440 (H7790_00445) purC 70442..71146 (+) 705 WP_017649245.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6927.67 Da        Isoelectric Point: 3.9286

>NTDB_id=477281 H7790_RS00425 WP_011054856.1 68628..68810(+) (prx) [Streptococcus pyogenes strain TSPY1349]
MLTYDEFKQAIDDGYITGDTVAIVRKNGQIFDYALPNEEVRNGEVVTYENVEEVLRELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=477281 H7790_RS00425 WP_011054856.1 68628..68810(+) (prx) [Streptococcus pyogenes strain TSPY1349]
ATGCTAACATACGATGAGTTTAAGCAAGCTATTGATGACGGATATATCACAGGCGACACAGTGGCGATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGCGTTGCCGAATGAAGAGGTAAGAAATGGGGAGGTTGTAACATACGAAAATGTGGAAGAAG
TGCTGAGGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS8232

80

100

0.8
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6
  prx Streptococcus pyogenes MGAS315

76.19

70

0.533