Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   H7791_RS05735 Genome accession   NZ_CP060644
Coordinates   1173484..1173666 (-) Length   60 a.a.
NCBI ID   WP_011054726.1    Uniprot ID   A0A5S4TS04
Organism   Streptococcus pyogenes strain TSPY1309     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1173484..1213371 1173484..1173666 within 0


Gene organization within MGE regions


Location: 1173484..1213371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7791_RS05735 (H7791_05730) prx 1173484..1173666 (-) 183 WP_011054726.1 hypothetical protein Regulator
  H7791_RS05740 (H7791_05735) mf2 1173906..1174664 (+) 759 WP_011184727.1 DNase Mf2 -
  H7791_RS05745 (H7791_05740) speC 1174775..1175482 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  H7791_RS05750 (H7791_05745) - 1175558..1176892 (-) 1335 WP_228634917.1 GH25 family lysozyme -
  H7791_RS05755 (H7791_05750) - 1177004..1177189 (-) 186 WP_002990010.1 holin -
  H7791_RS05760 (H7791_05755) - 1177186..1177485 (-) 300 WP_111713279.1 hypothetical protein -
  H7791_RS05765 (H7791_05760) - 1177501..1178127 (-) 627 WP_115225213.1 hypothetical protein -
  H7791_RS05770 (H7791_05765) - 1178130..1178558 (-) 429 WP_014411850.1 DUF1617 family protein -
  H7791_RS05775 (H7791_05770) - 1178570..1180456 (-) 1887 WP_111702896.1 gp58-like family protein -
  H7791_RS05780 (H7791_05775) - 1180469..1181476 (-) 1008 WP_115225215.1 hyaluronoglucosaminidase -
  H7791_RS05785 (H7791_05780) - 1181473..1183452 (-) 1980 WP_228634918.1 phage tail protein -
  H7791_RS05790 (H7791_05785) - 1183462..1184304 (-) 843 WP_015986718.1 phage tail family protein -
  H7791_RS05795 (H7791_05790) - 1184316..1188473 (-) 4158 WP_228634919.1 tape measure protein -
  H7791_RS05800 (H7791_05795) - 1188488..1188721 (-) 234 WP_002983445.1 hypothetical protein -
  H7791_RS05805 (H7791_05800) - 1188796..1189251 (-) 456 WP_023611380.1 tail assembly chaperone -
  H7791_RS05810 (H7791_05805) - 1189305..1189904 (-) 600 WP_023611368.1 phage major tail protein, TP901-1 family -
  H7791_RS05815 (H7791_05810) - 1189916..1190275 (-) 360 WP_065358788.1 hypothetical protein -
  H7791_RS05820 (H7791_05815) - 1190279..1190623 (-) 345 WP_023611373.1 HK97-gp10 family putative phage morphogenesis protein -
  H7791_RS05825 (H7791_05820) - 1190620..1190898 (-) 279 WP_000639437.1 hypothetical protein -
  H7791_RS05830 (H7791_05825) - 1190909..1191265 (-) 357 WP_023611376.1 phage head-tail connector protein -
  H7791_RS05835 (H7791_05830) - 1191277..1192164 (-) 888 WP_065358789.1 phage capsid protein -
  H7791_RS05840 (H7791_05835) - 1192177..1192746 (-) 570 WP_023611382.1 DUF4355 domain-containing protein -
  H7791_RS05845 (H7791_05840) - 1192993..1193262 (-) 270 WP_023611375.1 hypothetical protein -
  H7791_RS05850 (H7791_05845) - 1193265..1193453 (-) 189 WP_065358790.1 hypothetical protein -
  H7791_RS05855 (H7791_05850) - 1193481..1194923 (-) 1443 WP_065358791.1 minor capsid protein -
  H7791_RS05860 (H7791_05855) - 1194889..1196421 (-) 1533 WP_110407981.1 phage portal protein -
  H7791_RS05865 (H7791_05860) - 1196437..1197714 (-) 1278 WP_228634920.1 PBSX family phage terminase large subunit -
  H7791_RS05870 (H7791_05865) - 1197704..1198156 (-) 453 WP_228635035.1 terminase small subunit -
  H7791_RS05875 (H7791_05870) - 1198246..1198662 (-) 417 WP_002988747.1 DUF722 domain-containing protein -
  H7791_RS05880 (H7791_05875) - 1198796..1199065 (-) 270 WP_228634921.1 hypothetical protein -
  H7791_RS05885 (H7791_05880) - 1199062..1199238 (-) 177 WP_228634922.1 hypothetical protein -
  H7791_RS05890 (H7791_05885) - 1199235..1199402 (-) 168 WP_023079219.1 hypothetical protein -
  H7791_RS05895 (H7791_05890) - 1199403..1200725 (-) 1323 WP_109981995.1 SNF2-related protein -
  H7791_RS05900 (H7791_05895) - 1200722..1200997 (-) 276 WP_023613183.1 VRR-NUC domain-containing protein -
  H7791_RS05905 (H7791_05900) - 1201386..1203770 (-) 2385 WP_228634923.1 phage/plasmid primase, P4 family -
  H7791_RS05910 (H7791_05905) - 1203775..1205697 (-) 1923 WP_228634924.1 DNA polymerase -
  H7791_RS05915 (H7791_05910) - 1205740..1206303 (-) 564 WP_086934854.1 DUF2815 family protein -
  H7791_RS05920 (H7791_05915) - 1206312..1207469 (-) 1158 WP_011888943.1 DUF2800 domain-containing protein -
  H7791_RS05925 (H7791_05920) - 1207469..1207768 (-) 300 WP_002988708.1 hypothetical protein -
  H7791_RS05930 (H7791_05925) - 1207857..1208060 (-) 204 WP_023611025.1 hypothetical protein -
  H7791_RS05935 (H7791_05930) - 1208057..1208407 (-) 351 WP_136097199.1 hypothetical protein -
  H7791_RS05940 (H7791_05935) - 1208553..1208939 (-) 387 WP_228634925.1 hypothetical protein -
  H7791_RS05945 (H7791_05940) - 1208936..1209139 (-) 204 WP_000049475.1 hypothetical protein -
  H7791_RS05950 (H7791_05945) - 1209132..1209302 (-) 171 WP_023611037.1 hypothetical protein -
  H7791_RS05955 (H7791_05950) - 1209331..1209588 (-) 258 WP_136019444.1 hypothetical protein -
  H7791_RS05960 (H7791_05955) - 1209676..1209876 (-) 201 WP_227868729.1 hypothetical protein -
  H7791_RS05965 (H7791_05960) - 1209927..1210118 (-) 192 WP_136019445.1 hypothetical protein -
  H7791_RS05970 (H7791_05965) - 1210139..1210498 (-) 360 WP_136019446.1 hypothetical protein -
  H7791_RS05975 (H7791_05970) - 1210792..1211142 (+) 351 WP_136019447.1 helix-turn-helix domain-containing protein -
  H7791_RS05980 (H7791_05975) - 1211156..1211539 (+) 384 WP_002988673.1 ImmA/IrrE family metallo-endopeptidase -
  H7791_RS05985 (H7791_05980) - 1211550..1212101 (+) 552 WP_047149516.1 hypothetical protein -
  H7791_RS05990 (H7791_05985) - 1212274..1213371 (+) 1098 WP_063629417.1 site-specific integrase -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6771.70 Da        Isoelectric Point: 3.9944

>NTDB_id=477265 H7791_RS05735 WP_011054726.1 1173484..1173666(-) (prx) [Streptococcus pyogenes strain TSPY1309]
MLTYDEFKQAIDNGYIVGDTVAIVRKNGQIFDYVLPGEKVRPSEVVAEEIVEEVVVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=477265 H7791_RS05735 WP_011054726.1 1173484..1173666(-) (prx) [Streptococcus pyogenes strain TSPY1309]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAACGGATATATCGTAGGAGACACAGTAGCGATTGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCTGGCGAAAAAGTCAGACCGTCGGAGGTTGTGGCTGAGGAAATAGTGGAAGAGG
TGGTGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5S4TS04

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS8232

80

100

0.8

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6