NTDB

Overview

Name	clpP	Type	Regulator
Locus tag	H7791_RS01770	Genome accession	NZ_CP060644
Coordinates	336621..337211 (+)	Length	196 a.a.
NCBI ID	WP_002985850.1	Uniprot ID	A0A9X8T4H8
Organism	Streptococcus pyogenes strain TSPY1309
Function	degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 331621..342211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7791_RS01755 (H7791_01765)	-	332433..333878 (-)	1446	WP_136019228.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-
H7791_RS01760 (H7791_01770)	-	333966..335600 (+)	1635	WP_136116694.1	polysaccharide biosynthesis protein	-
H7791_RS01765 (H7791_01775)	upp	335768..336397 (+)	630	WP_002985854.1	uracil phosphoribosyltransferase	-
H7791_RS01770 (H7791_01780)	clpP	336621..337211 (+)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
H7791_RS01775 (H7791_01785)	-	337702..337977 (+)	276	WP_002985847.1	YlbG family protein	-
H7791_RS01780 (H7791_01790)	tmk	338226..338861 (+)	636	WP_010921930.1	dTMP kinase	-
H7791_RS01785 (H7791_01795)	-	338879..339754 (+)	876	WP_136116693.1	DNA polymerase III subunit delta'	-
H7791_RS01790 (H7791_01800)	yabA	340257..340580 (+)	324	WP_002985838.1	DNA replication initiation control protein YabA	-
H7791_RS01795 (H7791_01805)	rsmI	340585..341448 (+)	864	WP_136020762.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
H7791_RS01800 (H7791_01810)	-	341475..341867 (+)	393	WP_002985833.1	DUF5684 domain-containing protein	-

Sequence

Protein

Download Length: 196 a.a. Molecular weight: 21648.88 Da Isoelectric Point: 5.2834

                                >NTDB_id=477248 H7791_RS01770 WP_002985850.1 336621..337211(+) (clpP) [Streptococcus pyogenes strain TSPY1309]

MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN

FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK

TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

Download Length: 591 bp

                                >NTDB_id=477248 H7791_RS01770 WP_002985850.1 336621..337211(+) (clpP) [Streptococcus pyogenes strain TSPY1309]

ATGATTCCTGTTGTTATTGAACAAACTAGCCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT

TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA

ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC

TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA

AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA

CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGGAAA

ACGATTAAACAAATTCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA

TGAAATCATGGAAAACAACGAACTAAAATAA

Domains

Predicted by InterproScan.

Clp protease (CLP_protease)

(11-192)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561

Detailed information NTG0477248