Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   H7791_RS01445 Genome accession   NZ_CP060644
Coordinates   274166..274717 (+) Length   183 a.a.
NCBI ID   WP_323744234.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1309     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 269166..279717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7791_RS01445 (H7791_01455) comX/sigX/comX2/sigX2 274166..274717 (+) 552 WP_323744234.1 sigma-70 family RNA polymerase sigma factor Regulator
  H7791_RS01450 (H7791_01460) - 275276..275803 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  H7791_RS01455 (H7791_01465) yqeH 275803..276921 (+) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  H7791_RS01460 (H7791_01470) yhbY 276946..277254 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  H7791_RS01465 (H7791_01475) - 277323..277955 (+) 633 WP_031488555.1 nicotinate-nucleotide adenylyltransferase -
  H7791_RS01470 (H7791_01480) yqeK 277952..278545 (+) 594 WP_038433908.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  H7791_RS01475 (H7791_01485) rsfS 278569..278922 (+) 354 WP_011017339.1 ribosome silencing factor -
  H7791_RS01480 (H7791_01490) - 278970..279713 (+) 744 WP_014407307.1 class I SAM-dependent DNA methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22267.05 Da        Isoelectric Point: 10.0375

>NTDB_id=477246 H7791_RS01445 WP_323744234.1 274166..274717(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY1309]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQDRMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=477246 H7791_RS01445 WP_323744234.1 274166..274717(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY1309]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGATCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.