Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   H7793_RS07900 Genome accession   NZ_CP060642
Coordinates   1577679..1578230 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1312     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1572679..1583230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7793_RS07865 (H7793_07865) - 1572683..1573426 (-) 744 WP_002991085.1 class I SAM-dependent DNA methyltransferase -
  H7793_RS07870 (H7793_07870) rsfS 1573474..1573827 (-) 354 WP_002991088.1 ribosome silencing factor -
  H7793_RS07875 (H7793_07875) yqeK 1573851..1574444 (-) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  H7793_RS07880 (H7793_07880) - 1574441..1575073 (-) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -
  H7793_RS07885 (H7793_07885) yhbY 1575142..1575450 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  H7793_RS07890 (H7793_07890) yqeH 1575475..1576593 (-) 1119 WP_002991096.1 ribosome biogenesis GTPase YqeH -
  H7793_RS07895 (H7793_07895) - 1576593..1577120 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  H7793_RS07900 (H7793_07900) comX/sigX/comX2/sigX2 1577679..1578230 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=477165 H7793_RS07900 WP_010921894.1 1577679..1578230(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY1312]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=477165 H7793_RS07900 WP_010921894.1 1577679..1578230(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY1312]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.