Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   H7795_RS07790 Genome accession   NZ_CP060641
Coordinates   1560215..1560766 (-) Length   183 a.a.
NCBI ID   WP_115255797.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY210     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1555215..1565766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7795_RS07765 (H7795_07735) - 1556581..1557426 (+) 846 WP_002982833.1 mechanosensitive ion channel family protein -
  H7795_RS07770 (H7795_07740) - 1557491..1558051 (-) 561 WP_002988142.1 TIGR01440 family protein -
  H7795_RS07775 (H7795_07745) - 1558065..1558535 (-) 471 WP_002988139.1 ECF transporter S component -
  H7795_RS07780 (H7795_07750) - 1558525..1559289 (-) 765 WP_002988136.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  H7795_RS07785 (H7795_07755) truA 1559279..1560028 (-) 750 WP_002988132.1 tRNA pseudouridine(38-40) synthase TruA -
  H7795_RS07790 (H7795_07760) comX/sigX/comX2/sigX2 1560215..1560766 (-) 552 WP_115255797.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22267.05 Da        Isoelectric Point: 10.0375

>NTDB_id=477112 H7795_RS07790 WP_115255797.1 1560215..1560766(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY210]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEVGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=477112 H7795_RS07790 WP_115255797.1 1560215..1560766(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY210]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGGTAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.