Detailed information NTG0047695

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LLH_RS06275
• Genome accession: NC_017492
• Coordinates: 1221530..1222378 (-)
• Length: 282 a.a.
• NCBI ID: WP_014572602.1
• Uniprot ID: -
• Organism: Lactococcus cremoris subsp. cremoris A76
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1216530..1227378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLH_RS06260 (llh_6555)	xerS	1216600..1217670 (+)	1071	WP_014572599.1	tyrosine recombinase XerS	-
LLH_RS06265 (llh_6560)	trmFO	1217720..1219066 (-)	1347	WP_014572600.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LLH_RS06270 (llh_6565)	topA	1219138..1221264 (-)	2127	WP_014572601.1	type I DNA topoisomerase	-
LLH_RS06275 (llh_6570)	dprA	1221530..1222378 (-)	849	WP_014572602.1	DNA-processing protein DprA	Machinery gene
LLH_RS06280 (llh_6575)	-	1222527..1222907 (-)	381	WP_014572603.1	RidA family protein	-
LLH_RS06285 (llh_6580)	budA	1222947..1223657 (-)	711	WP_011676302.1	acetolactate decarboxylase	-
LLH_RS06290 (llh_6585)	-	1223800..1224975 (-)	1176	WP_041168215.1	IS256-like element IS905 family transposase	-
LLH_RS06295 (llh_6590)	ilvA	1225113..1226363 (-)	1251	WP_014572605.1	threonine ammonia-lyase IlvA	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31948.10 Da
• Isoelectric Point: 9.7528

>NTDB_id=47695 LLH_RS06275 WP_014572602.1 1221530..1222378(-) (dprA) [Lactococcus cremoris subsp. cremoris A76]
MIINFDLFRWKKAGMTNLGVNKLLKFFHKYDIKISLRQMGQVAQVKSIPNFIEQYKNQDVKKLRIDYKKFSSFSILDDLY
PERLREIYNPPVLIFYQGNIDLLKNPKLAFVGSRLAGQSGIKAVQKIITELNQSFTIVSGLAKGIDTASHLSAIKTKTPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEEKLRSGSLITCERALEEG
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN

Nucleotide

• Length: 849 bp

>NTDB_id=47695 LLH_RS06275 WP_014572602.1 1221530..1222378(-) (dprA) [Lactococcus cremoris subsp. cremoris A76]
ATGATTATAAATTTTGATTTATTTCGTTGGAAAAAAGCAGGAATGACCAATCTTGGTGTAAATAAGCTCTTAAAATTTTT
CCACAAATATGATATAAAAATAAGCTTACGACAAATGGGACAAGTGGCTCAAGTCAAATCAATCCCTAACTTTATCGAAC
AATATAAAAATCAGGACGTAAAGAAACTCAGGATAGACTATAAAAAATTTTCCTCCTTTTCCATTCTTGATGACCTTTAT
CCCGAGCGTCTAAGAGAAATCTACAACCCACCCGTTTTAATTTTTTATCAGGGAAATATTGATTTATTAAAAAATCCTAA
ACTTGCCTTTGTTGGAAGCCGCCTAGCAGGTCAATCAGGGATAAAAGCTGTCCAAAAAATTATCACAGAATTGAATCAAT
CCTTTACAATAGTAAGCGGGCTTGCTAAAGGGATTGACACAGCCAGCCATCTGTCAGCAATTAAAACTAAAACACCAACA
ATTGCTGTTATTGGTACAGGATTGGATATTTTCTATCCACTAGAAAATCGTAAAATACAGGAATATCTAGCAAAAAATCA
ATTAGTTTTAAGTGAATATTCATTAGGCGAAAAACCACTTAAATACCACTTTCCAGAGCGCAATCGAATTATTGCTGGTC
TTTCACGGGGAGTTGTTGTCGTGGAAGAAAAATTAAGAAGTGGCAGTTTAATCACCTGTGAAAGGGCACTGGAAGAAGGA
AGAGATATCTTTGCCATCCCTGGAAATATTGCAGATGGAACATCTGATGGCTGTAATCATCTTATTCAACAAGGAGCAAA
ACTTGTCTATCAAGCTCAAGATATTTTAGAAGAATATTTGTACAATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-270)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (3-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	97.163	100	0.972
dprA	Streptococcus mutans UA159	59.42	97.872	0.582
dprA/cilB/dalA	Streptococcus mitis SK321	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus pneumoniae R6	55	99.291	0.546
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	55	99.291	0.546
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	55	99.291	0.546
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	55	99.291	0.546
dprA/cilB/dalA	Streptococcus pneumoniae D39	55	99.291	0.546
dprA	Bacillus subtilis subsp. subtilis str. 168	39.273	97.518	0.383
dprA	Vibrio campbellii strain DS40M4	35.314	100	0.379
dprA	Legionella pneumophila strain ERS1305867	38.768	97.872	0.379
dprA	Haemophilus influenzae Rd KW20	39.259	95.745	0.376