Detailed information NTG0474379

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: H7F25_RS14635
• Genome accession: NZ_CP060191
• Coordinates: 2875331..2875927 (+)
• Length: 198 a.a.
• NCBI ID: WP_024427684.1
• Uniprot ID: -
• Organism: Bacillus sp. PAMC28571
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2870331..2880927

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7F25_RS14610 (H7F25_14610)	opp1B	2870510..2871439 (-)	930	WP_024423539.1	nickel/cobalt ABC transporter permease	-
H7F25_RS14615 (H7F25_14615)	nikA	2871455..2873095 (-)	1641	WP_122631948.1	nickel ABC transporter substrate-binding protein	-
H7F25_RS14620 (H7F25_14620)	-	2873215..2874384 (-)	1170	WP_185853862.1	macrolide family glycosyltransferase	-
H7F25_RS14625 (H7F25_14625)	-	2874613..2874795 (+)	183	WP_185853863.1	hypothetical protein	-
H7F25_RS14635 (H7F25_14635)	clpP	2875331..2875927 (+)	597	WP_024427684.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
H7F25_RS14640 (H7F25_14640)	-	2875988..2876566 (-)	579	WP_041107909.1	TIGR00730 family Rossman fold protein	-
H7F25_RS14645 (H7F25_14645)	-	2876704..2877045 (+)	342	WP_044333970.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
H7F25_RS14650 (H7F25_14650)	-	2877073..2878695 (-)	1623	WP_185853864.1	SulP family inorganic anion transporter	-
H7F25_RS14655 (H7F25_14655)	-	2878733..2879314 (-)	582	WP_185853865.1	carbonic anhydrase	-
H7F25_RS14660 (H7F25_14660)	-	2879868..2880845 (+)	978	WP_073207521.1	D-glycerate dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21832.00 Da
• Isoelectric Point: 4.6835

>NTDB_id=474379 H7F25_RS14635 WP_024427684.1 2875331..2875927(+) (clpP) [Bacillus sp. PAMC28571]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK

Nucleotide

• Length: 597 bp

>NTDB_id=474379 H7F25_RS14635 WP_024427684.1 2875331..2875927(+) (clpP) [Bacillus sp. PAMC28571]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTATGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTCGGCGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.939	100	0.939
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53