Detailed information NTG0469873

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: H1R16_RS07820
• Genome accession: NZ_CP059472
• Coordinates: 1696416..1697525 (-)
• Length: 369 a.a.
• NCBI ID: WP_181887133.1
• Uniprot ID: -
• Organism: Marnyiella aurantia strain CX-624
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1691416..1702525

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1R16_RS07795 (H1R16_07795)	-	1691929..1692810 (+)	882	WP_181887138.1	DMT family transporter	-
H1R16_RS07800 (H1R16_07800)	-	1692823..1693173 (-)	351	WP_181887137.1	helix-turn-helix transcriptional regulator	-
H1R16_RS07805 (H1R16_07805)	-	1693386..1694003 (+)	618	WP_181887136.1	hypothetical protein	-
H1R16_RS07810 (H1R16_07810)	-	1694294..1694722 (+)	429	WP_181887135.1	hypothetical protein	-
H1R16_RS07815 (H1R16_07815)	gdhA	1694871..1696229 (-)	1359	WP_181887134.1	NADP-specific glutamate dehydrogenase	-
H1R16_RS07820 (H1R16_07820)	dprA	1696416..1697525 (-)	1110	WP_181887133.1	DNA-processing protein DprA	Machinery gene
H1R16_RS07825 (H1R16_07825)	-	1697556..1698329 (-)	774	WP_181887132.1	rhomboid family intramembrane serine protease	-
H1R16_RS07830 (H1R16_07830)	-	1698518..1699606 (+)	1089	WP_228451379.1	DUF3078 domain-containing protein	-
H1R16_RS07835 (H1R16_07835)	sufD	1699677..1700984 (-)	1308	WP_181887130.1	Fe-S cluster assembly protein SufD	-
H1R16_RS07840 (H1R16_07840)	sufC	1701003..1701746 (-)	744	WP_181887129.1	Fe-S cluster assembly ATPase SufC	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41008.99 Da
• Isoelectric Point: 7.4214

>NTDB_id=469873 H1R16_RS07820 WP_181887133.1 1696416..1697525(-) (dprA) [Marnyiella aurantia strain CX-624]
MFTDEHLYSIALRKCSNVGDINFYKLVSAVGSAKEVWSFPKRELSKILGIGNKTLHEIGSAEVLCSAEEEIKFCERKQLQ
IRLRHLGQLPPLLNECEDAPAVLYQKGDFKTDQQAFSMVGTRNITAYGKGFVQEFFQEIRKTGIISVSGLALGVDTEVHE
QSIKQEIPTVAVLAHGFHTMYPAKNRKLAGRILEQGGVLLSEFNSSQKPDRENFIQRNRIVAGLSEATIVVETAFGGGSV
STVGFANTYNREVYALPGKITDKYSQGCNMVIAQNKARIISTVTDLVDELGLDSKKSFMEPLFPKSELRRQLSEDQKLIY
QIIMDNPYISLDEIAVKTSSASHKILSHLLELELNGLVKALSGRQYTAN

Nucleotide

• Length: 1110 bp

>NTDB_id=469873 H1R16_RS07820 WP_181887133.1 1696416..1697525(-) (dprA) [Marnyiella aurantia strain CX-624]
ATGTTTACGGACGAACACCTGTATTCCATCGCTTTACGCAAATGCAGTAATGTAGGAGACATCAATTTCTACAAACTTGT
CAGTGCAGTTGGTTCTGCGAAGGAAGTTTGGAGTTTTCCCAAGCGGGAACTTTCCAAAATCCTTGGCATTGGCAATAAAA
CGCTTCATGAAATAGGTTCAGCGGAAGTGCTGTGTTCTGCTGAAGAAGAGATTAAATTCTGTGAACGAAAGCAGCTTCAG
ATACGGCTCAGGCACCTGGGACAGTTACCACCACTTCTTAACGAATGCGAAGATGCGCCAGCTGTTCTGTATCAGAAAGG
CGATTTCAAAACGGACCAGCAGGCTTTTTCTATGGTGGGAACCAGGAATATTACAGCCTACGGCAAAGGCTTCGTTCAGG
AATTCTTTCAGGAAATCCGGAAAACAGGGATCATCTCAGTAAGCGGACTTGCCCTTGGGGTAGATACCGAAGTTCATGAG
CAATCAATCAAACAGGAAATTCCGACTGTAGCTGTTTTGGCGCATGGATTCCACACCATGTATCCTGCAAAAAACCGAAA
ACTTGCCGGCCGGATACTTGAGCAGGGCGGAGTACTACTGTCGGAATTTAACAGTTCACAGAAGCCGGACAGGGAAAATT
TCATTCAGAGAAACAGAATTGTCGCAGGTTTATCTGAGGCTACAATTGTGGTAGAGACCGCGTTCGGCGGTGGCTCTGTA
AGCACCGTGGGTTTTGCAAACACCTATAACCGGGAGGTCTATGCTTTACCCGGAAAGATTACGGACAAATACAGTCAGGG
CTGCAATATGGTCATTGCTCAGAATAAGGCCAGAATCATCAGCACAGTAACCGATTTAGTGGATGAATTAGGTCTGGACA
GCAAAAAGAGTTTCATGGAACCACTGTTTCCCAAATCTGAACTTCGGCGCCAATTGTCTGAAGATCAAAAACTCATCTAC
CAGATCATTATGGACAATCCCTACATTTCTCTTGACGAAATTGCAGTTAAAACCTCCTCGGCATCACATAAGATTCTCAG
TCATCTTCTTGAACTGGAACTTAATGGGTTAGTTAAGGCGCTATCCGGGAGGCAGTATACCGCAAATTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (307-363)

• DNA recombination-mediator protein A (DNA_processg_A) (74-280)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	52.877	98.916	0.523