Detailed information NTG0467127

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: H0S56_RS07015
• Genome accession: NZ_CP059081
• Coordinates: 1435134..1436330 (+)
• Length: 398 a.a.
• NCBI ID: WP_195726004.1
• Uniprot ID: -
• Organism: Acinetobacter lwoffii strain 12CE1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1430134..1441330

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0S56_RS07000 (H0S56_06995)	-	1430783..1431832 (+)	1050	WP_004280427.1	3-deoxy-7-phosphoheptulonate synthase	-
H0S56_RS14315	-	1432128..1432271 (+)	144	Protein_1350	type IV pili twitching motility protein PilT	-
H0S56_RS07005 (H0S56_07000)	-	1432452..1433786 (-)	1335	WP_004646891.1	ISNCY family transposase	-
H0S56_RS07010 (H0S56_07005)	-	1433921..1434550 (-)	630	WP_195726003.1	hypothetical protein	-
H0S56_RS07015 (H0S56_07010)	pilU	1435134..1436330 (+)	1197	WP_195726004.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
H0S56_RS07020 (H0S56_07015)	-	1436412..1437587 (-)	1176	WP_195726005.1	MFS transporter	-
H0S56_RS07025 (H0S56_07020)	gcvH	1437839..1438213 (-)	375	WP_004280423.1	glycine cleavage system protein GcvH	-
H0S56_RS07030 (H0S56_07025)	-	1438296..1439324 (-)	1029	WP_004280421.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 45094.69 Da
• Isoelectric Point: 6.6224

>NTDB_id=467127 H0S56_RS07015 WP_195726004.1 1435134..1436330(+) (pilU) [Acinetobacter lwoffii strain 12CE1]
MFTAELLDEAKKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQELTAEKTKLFAYSLMNDKQRKEFETELEC
NFAITVPGVSRFRVNVFVQQLNVGMVIRTITAEIPNFQKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
SNNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTQDGKGRRAAIEIMLNTPLISDLILKGEFHELKAIMAKS
RELGMQTFDQALFDLYNQGEISYEEALRNADSTNELRLQIKLKSNRQDTTVATEATQFTMMQEPKAEEKQAENTSVSE

Nucleotide

• Length: 1197 bp

>NTDB_id=467127 H0S56_RS07015 WP_195726004.1 1435134..1436330(+) (pilU) [Acinetobacter lwoffii strain 12CE1]
ATGTTCACGGCAGAATTGTTGGACGAAGCAAAAAAATTCATGCATCACATGCTGACCAAGGTGGTGGAATATGGCGGTTC
AGATTTATTTATTACGGCTGATTTTCCACCGAGTATTAAACATCAAGGCTTAATGAAACCTTTTGGACAGCAGGAACTCA
CAGCTGAAAAAACCAAGCTGTTTGCCTACAGTCTGATGAATGATAAACAGCGTAAAGAATTTGAAACTGAACTTGAGTGC
AATTTTGCCATCACCGTGCCAGGTGTTTCCCGTTTTCGGGTCAATGTGTTTGTACAACAACTTAATGTCGGTATGGTAAT
TCGTACCATTACTGCAGAAATTCCAAATTTCCAGAAGCTGAAATTACCGGAATCTCTGAAACATGTGATTATGGAAAAAC
GTGGACTGGTATTGGTAGTCGGAGGAACAGGTTCCGGTAAATCAACTTCACTCGCAGCCATGATTGACTATCGAAATGAA
AATTCAGCCGGGCATATCATTACCGTAGAAGATCCGGTTGAATATGTGCACAAGCATAAAAAATCCATGATTACTCATCG
TGAAGTCGGAGTGGACTGCCATTCCTGGCATAATGCGCTGAAAAATACCTTGCGTCAGGCTCCGGATGTAATTCTGATCG
GGGAAATTCGCGATACTGAAACTATGGAACATGCGATTGCTTTTGCGGAAACTGGCCATTTGTGTTTGGGAACTCTGCAT
TCCAATAATGCCAACCAGACTTTGGATCGGATTATCAACTTCTTCCCTGAAGAACGCCGGAATCAGTTATTGATGGATTT
GTCTTCAAATATGAAGGCAATTATTTCACAGCGTCTGATTCGGACTCAAGATGGTAAAGGCCGTCGGGCAGCGATTGAAA
TCATGCTGAATACGCCTTTGATTTCCGACCTGATCCTGAAAGGCGAGTTTCATGAGCTGAAAGCCATTATGGCTAAATCC
CGTGAACTGGGCATGCAGACCTTTGACCAGGCCTTATTTGACCTGTATAACCAGGGTGAAATTTCTTATGAAGAAGCCTT
GCGCAATGCCGATTCGACCAATGAACTGCGCTTACAAATCAAGCTGAAAAGTAACCGACAGGACACTACCGTAGCCACAG
AGGCAACCCAATTCACCATGATGCAAGAGCCAAAAGCGGAAGAGAAACAAGCAGAGAATACTTCGGTGTCAGAATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (118-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	61.494	87.437	0.538
pilU	Acinetobacter baylyi ADP1	55.908	87.186	0.487
pilU	Vibrio cholerae strain A1552	52.676	89.196	0.47
pilT	Pseudomonas aeruginosa PAK	44.479	81.91	0.364
pilT	Acinetobacter nosocomialis M2	43.636	82.915	0.362
pilT	Acinetobacter baumannii D1279779	43.636	82.915	0.362
pilT	Acinetobacter baumannii strain A118	43.636	82.915	0.362