Detailed information NTG0467116

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: H0S56_RS01530
• Genome accession: NZ_CP059081
• Coordinates: 341607..342665 (+)
• Length: 352 a.a.
• NCBI ID: WP_195725502.1
• Uniprot ID: -
• Organism: Acinetobacter lwoffii strain 12CE1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 336607..347665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0S56_RS01515 (H0S56_01515)	-	336661..337464 (+)	804	WP_195726027.1	putative RNA methyltransferase	-
H0S56_RS01520 (H0S56_01520)	-	337510..338814 (-)	1305	WP_195725500.1	IS4 family transposase	-
H0S56_RS01525 (H0S56_01525)	ponA	338916..341441 (-)	2526	WP_195725501.1	penicillin-binding protein PBP1a	-
H0S56_RS01530 (H0S56_01530)	pilM	341607..342665 (+)	1059	WP_195725502.1	pilus assembly protein PilM	Machinery gene
H0S56_RS01535 (H0S56_01535)	comN	342665..343303 (+)	639	WP_195725503.1	PilN domain-containing protein	Machinery gene
H0S56_RS01540 (H0S56_01540)	comO	343300..344022 (+)	723	WP_195725504.1	type 4a pilus biogenesis protein PilO	Machinery gene
H0S56_RS01545 (H0S56_01545)	pilP	344022..344549 (+)	528	WP_005108515.1	pilus assembly protein PilP	Machinery gene
H0S56_RS01550 (H0S56_01550)	pilQ	344567..346720 (+)	2154	WP_195725505.1	type IV pilus secretin PilQ family protein	Machinery gene
H0S56_RS01555 (H0S56_01555)	aroK	346757..347293 (+)	537	WP_005101380.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38991.51 Da
• Isoelectric Point: 4.5358

>NTDB_id=467116 H0S56_RS01530 WP_195725502.1 341607..342665(+) (pilM) [Acinetobacter lwoffii strain 12CE1]
MRRLYRKPNKGLIGVDISSTSVKVLELSVKSGRYWVESYALIPLSENSVVEKNILNPEAVADALGRAINLGNTQSNQAAF
AIPTSMVITKIIEMDADMSDDEREVQIREDAEQYIPFPLDEASLDFEVLPDRLANPNRVNVLLVATRIENVEARSEVLEI
SGLTPKIADVESFALENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKTRALPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=467116 H0S56_RS01530 WP_195725502.1 341607..342665(+) (pilM) [Acinetobacter lwoffii strain 12CE1]
GTGCGCAGGTTATATCGTAAACCAAATAAGGGGTTAATAGGAGTCGATATTAGTTCGACTTCTGTTAAGGTTTTAGAACT
TTCTGTAAAAAGTGGCCGTTACTGGGTAGAGAGCTATGCTTTGATCCCATTATCGGAAAACAGTGTTGTTGAAAAAAACA
TCTTAAACCCAGAAGCAGTCGCTGATGCCCTTGGGCGTGCAATTAATTTGGGTAATACCCAGTCGAATCAGGCCGCTTTT
GCGATTCCAACTTCAATGGTCATCACCAAAATCATTGAGATGGATGCAGACATGTCGGATGATGAACGTGAAGTCCAGAT
TCGTGAAGATGCGGAACAATACATTCCTTTTCCACTCGATGAAGCGAGTCTGGATTTTGAAGTTCTGCCAGACCGTCTTG
CCAATCCGAACCGGGTCAATGTGCTGCTGGTCGCTACCCGAATTGAAAATGTCGAAGCACGTTCTGAAGTTTTGGAAATT
TCTGGTCTAACGCCTAAGATTGCAGATGTAGAAAGTTTTGCGCTGGAAAATGCCTTCAAAGTATTTTCGGATACTTTGCC
GATGGGGGTCAATACGGTTGGTATCTTAGATATTGGTCATAGTATGACGACCTTGTCGGTGATGCAGAACAACAAGATTA
TTTATACTCGTGAGCAGGTGTTTGGCGGTAAGCAATTAACTCAGGAAATTCAGAATCGTTATGGATTATCCTTTGAAGAA
GCTGGACGTGCTAAAAAAACCCGTGCCTTGCCTGATGATTATGATATTGAAGTCCTAGAACCCTTCTTGGATGCCGTGGT
ACAACAGGCAGCCCGTTCATTACAATTCTTCTTTTCATCTTCTCAGTTTAATGAGATTGACCATATTTTACTGGCCGGCG
GGAATGCCAATATTCCAGGTCTGGCAAAATTATTACAACAAAAACTCGGTTACCGTGTCACGATCGCGAATCCATTTTTG
CAAATGGGTTTTTCTCCTCAAATTGATATTAAAAAAATTGAAAATGACGCGTCATCACTCATGGTTGCATGCGGTTTGGC
ATTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	85.511	100	0.855
comM	Acinetobacter nosocomialis M2	85.227	100	0.852
comM	Acinetobacter baylyi ADP1	79.83	100	0.798
pilM	Legionella pneumophila strain ERS1305867	39.548	100	0.398