Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   JQR77_RS00395 Genome accession   NZ_CP069275
Coordinates   66487..66696 (+) Length   69 a.a.
NCBI ID   WP_023909312.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain EG007     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 61487..71696
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQR77_RS00365 (JQR77_00365) - 61816..62367 (+) 552 WP_084825664.1 hypothetical protein -
  JQR77_RS00370 - 62576..62722 (-) 147 Protein_52 protein rep -
  JQR77_RS00375 (JQR77_00370) - 62701..63072 (-) 372 WP_308250444.1 protein rep -
  JQR77_RS00380 (JQR77_00375) hdcB 63177..63611 (-) 435 WP_220018527.1 histidine decarboxylase maturation protein HdcB -
  JQR77_RS00385 (JQR77_00380) - 63628..65091 (-) 1464 WP_023909310.1 amino acid permease -
  JQR77_RS00390 (JQR77_00385) hdcA 65115..66050 (-) 936 WP_023909311.1 histidine decarboxylase, pyruvoyl type -
  JQR77_RS00395 (JQR77_00390) prx 66487..66696 (+) 210 WP_023909312.1 hypothetical protein Regulator
  JQR77_RS00400 (JQR77_00395) - 66865..69942 (+) 3078 WP_269859803.1 type I restriction endonuclease subunit R -
  JQR77_RS00405 (JQR77_00400) - 69942..71537 (+) 1596 WP_023910038.1 type I restriction-modification system subunit M -

Sequence

Protein


Download         Length: 69 a.a.        Molecular weight: 7912.06 Da        Isoelectric Point: 4.6263

>NTDB_id=464610 JQR77_RS00395 WP_023909312.1 66487..66696(+) (prx) [Streptococcus thermophilus strain EG007]
MLTYDEFKEAMDKGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILSLEKVSDIIKELADELGVSKTYI

Nucleotide


Download         Length: 210 bp        

>NTDB_id=464610 JQR77_RS00395 WP_023909312.1 66487..66696(+) (prx) [Streptococcus thermophilus strain EG007]
ATGCTAACCTATGATGAATTTAAAGAGGCTATGGACAAGGGTTTTATTAAAGGTGATACTGTCCAGATTGTCCGAAAGAA
TGGTAAGATACATGACTACGTTTTAGACGGTGAACGAGTTGAGCCACACGAAATATTAAGCTTAGAAAAGGTATCGGATA
TAATAAAGGAGTTAGCGGACGAGTTAGGCGTTAGTAAGACATATATATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

58.621

84.058

0.493
  prx Streptococcus pyogenes MGAS8232

57.627

85.507

0.493
  prx Streptococcus pyogenes MGAS315

57.627

85.507

0.493
  prx Streptococcus pyogenes MGAS315

56.897

84.058

0.478
  prx Streptococcus pyogenes MGAS315

73.81

60.87

0.449
  prx Streptococcus pyogenes MGAS315

73.171

59.42

0.435
  prx Streptococcus pyogenes MGAS315

68.182

63.768

0.435