Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   HW271_RS08725 Genome accession   NZ_CP058258
Coordinates   1763516..1764697 (+) Length   393 a.a.
NCBI ID   WP_178895635.1    Uniprot ID   A0A7H8ZBD7
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1758516..1769697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS08690 (HW271_08690) - 1759713..1760255 (+) 543 WP_178895631.1 TetR/AcrR family transcriptional regulator -
  HW271_RS08705 (HW271_08705) comE 1760499..1761251 (-) 753 WP_178895632.1 competence system response regulator transcription factor ComE Regulator
  HW271_RS08710 (HW271_08710) comD 1761248..1762567 (-) 1320 WP_178895633.1 competence system sensor histidine kinase ComD Regulator
  HW271_RS08720 (HW271_08720) rlmH 1762851..1763330 (-) 480 WP_178895634.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HW271_RS08725 (HW271_08725) htrA 1763516..1764697 (+) 1182 WP_178895635.1 S1C family serine protease Regulator
  HW271_RS08730 (HW271_08730) spo0J 1764757..1765518 (+) 762 WP_178895636.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 393 a.a.        Molecular weight: 41515.41 Da        Isoelectric Point: 5.2327

>NTDB_id=463264 HW271_RS08725 WP_178895635.1 1763516..1764697(+) (htrA) [Streptococcus sp. oral taxon 061 strain F0704]
MKNFNKFSKTIGQLLLVILISFFSGLLGSLAVLQFNQKQGRGEQNSAAITQTASKNENSTTQAVDKVKDAVVSVITYSSN
SQNSLLGSDETDTDTNSEQVYSEGSGVIYKKEGDTAYLVTNTHVINGAKKVDIRLADGTKVPGEIVGSDTYSDIAVVKIA
ADKVTTVAEFGDSSQLTVGETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTNAIQTDTAINPGNSGGPLI
NIQGQVIGITSSKIASNGGTSVEGLGFAIPANDVINIIKQLEKDGKVTRPALGIHMVNLSNLSTTDLQKLKLPGNVTSGV
AVRSVQKNMPANGHLQQYDVITKVDDTKISSTTELQNALYSHSIGDEMTVTYYRNGKEEKTTIKLDKSTSDLN

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=463264 HW271_RS08725 WP_178895635.1 1763516..1764697(+) (htrA) [Streptococcus sp. oral taxon 061 strain F0704]
ATGAAAAACTTTAACAAGTTTTCAAAAACAATTGGACAACTTTTACTAGTTATTCTTATTAGCTTTTTTAGTGGTCTATT
AGGAAGTTTGGCTGTTCTTCAATTCAACCAAAAGCAAGGAAGGGGAGAACAAAATAGTGCAGCGATCACTCAGACTGCTT
CGAAAAATGAAAATTCTACCACACAGGCTGTAGATAAAGTTAAAGATGCTGTTGTATCTGTCATTACTTACTCATCAAAC
TCTCAAAATAGTTTACTCGGATCTGATGAAACTGATACAGATACCAATTCTGAACAAGTATACAGCGAAGGTTCTGGTGT
CATTTATAAAAAGGAAGGGGATACTGCTTACCTTGTAACCAATACTCACGTTATTAATGGTGCTAAAAAAGTTGATATTC
GTTTAGCAGATGGCACAAAAGTCCCTGGTGAAATTGTGGGTTCTGATACTTATTCAGATATTGCCGTTGTAAAAATTGCT
GCAGATAAAGTCACAACAGTAGCCGAATTTGGTGATTCTAGTCAATTAACAGTTGGAGAAACAGCTATTGCAATCGGAAG
TCCTCTAGGTTCTGAATATGCCAATACTGTGACACAGGGGATTGTATCAAGTTTAAATAGAAATGTATCTCTAAAATCTG
AAGACGGACAAGCTATCTCAACCAATGCTATCCAAACAGATACAGCTATTAACCCTGGGAACTCAGGTGGTCCTTTGATT
AATATCCAAGGCCAAGTTATCGGTATTACATCAAGTAAGATTGCCTCTAATGGTGGAACATCTGTCGAAGGTCTTGGTTT
TGCCATTCCTGCAAACGATGTAATCAATATTATTAAGCAGTTGGAAAAAGATGGAAAAGTAACTCGACCTGCTCTTGGAA
TCCACATGGTTAACTTATCAAATCTTAGTACAACTGATCTTCAAAAACTAAAACTTCCTGGAAATGTTACTTCTGGTGTA
GCTGTTCGTTCTGTTCAAAAAAATATGCCTGCAAATGGACATTTACAACAATATGATGTCATCACAAAAGTAGATGATAC
CAAGATTTCATCTACAACTGAATTGCAAAATGCTCTATATAGTCACTCTATTGGAGATGAAATGACTGTAACTTATTACC
GTAATGGTAAAGAAGAAAAAACTACAATCAAACTAGATAAGAGTACAAGTGATTTAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H8ZBD7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

77.608

100

0.776

  htrA Streptococcus pneumoniae Rx1

77.354

100

0.774

  htrA Streptococcus pneumoniae D39

77.354

100

0.774

  htrA Streptococcus pneumoniae R6

77.354

100

0.774

  htrA Streptococcus pneumoniae TIGR4

77.354

100

0.774

  htrA Streptococcus gordonii str. Challis substr. CH1

67.172

100

0.677

  htrA Streptococcus mutans UA159

52.806

99.746

0.527