Detailed information NTG0463228

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: HW271_RS06010
• Genome accession: NZ_CP058258
• Coordinates: 1220828..1221418 (-)
• Length: 196 a.a.
• NCBI ID: WP_060956027.1
• Uniprot ID: -
• Organism: Streptococcus sp. oral taxon 061 strain F0704
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1215828..1226418

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HW271_RS05985 (HW271_05985)	-	1216524..1217288 (-)	765	WP_178895255.1	ABC transporter ATP-binding protein	-
HW271_RS05990 (HW271_05990)	-	1217288..1218244 (-)	957	WP_178895256.1	branched-chain amino acid ABC transporter permease	-
HW271_RS05995 (HW271_05995)	-	1218248..1219117 (-)	870	WP_178895257.1	branched-chain amino acid ABC transporter permease	-
HW271_RS06000 (HW271_06000)	-	1219234..1220394 (-)	1161	WP_178895258.1	ABC transporter substrate-binding protein	-
HW271_RS06005 (HW271_06005)	-	1220483..1220752 (-)	270	WP_178895259.1	YlbG family protein	-
HW271_RS06010 (HW271_06010)	clpP	1220828..1221418 (-)	591	WP_060956027.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
HW271_RS06015 (HW271_06015)	upp	1221581..1222210 (-)	630	WP_006150334.1	uracil phosphoribosyltransferase	-
HW271_RS06020 (HW271_06020)	-	1222300..1222767 (-)	468	WP_178895260.1	cytidine/deoxycytidylate deaminase family protein	-
HW271_RS06025 (HW271_06025)	-	1222786..1223343 (-)	558	WP_178895261.1	TetR/AcrR family transcriptional regulator	-
HW271_RS06030 (HW271_06030)	-	1223468..1224313 (+)	846	WP_178895262.1	DegV family protein	-
HW271_RS06035 (HW271_06035)	-	1224370..1225545 (+)	1176	WP_178895263.1	NAD(P)/FAD-dependent oxidoreductase	-
HW271_RS06040 (HW271_06040)	-	1225566..1226021 (+)	456	WP_178895264.1	8-oxo-dGTP diphosphatase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21389.39 Da
• Isoelectric Point: 4.4746

>NTDB_id=463228 HW271_RS06010 WP_060956027.1 1220828..1221418(-) (clpP) [Streptococcus sp. oral taxon 061 strain F0704]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGK
SVEQIHADAERDYWMSAQETLDYGFIDEIMANNSLN

Nucleotide

• Length: 591 bp

>NTDB_id=463228 HW271_RS06010 WP_060956027.1 1220828..1221418(-) (clpP) [Streptococcus sp. oral taxon 061 strain F0704]
ATGATTCCTGTAGTTATTGAACAAACAAGTCGTGGAGAACGCTCGTATGACATTTACTCACGTCTTCTTAAGGACCGCAT
TATCATGTTGACTGGACCAGTCGAAGACAATATGGCAAATTCAGTCATCGCCCAATTGCTTTTCTTGGATGCCCAAGATA
GTACAAAAGATATTTACCTTTATGTAAACACTCCTGGAGGTTCTGTATCAGCTGGTTTGGCAATCGTTGATACTATGAAC
TTTATCAAGGCAGATGTCCAAACTATCGTTATGGGAATGGCAGCCTCAATGGGTACAATTATTGCTTCAAGTGGAGCAAA
GGGCAAACGTTTCATGCTTCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACTCAGCAGA
CTGATATGGCCATTGCTGCTGAACACTTGCTTAAAACTCGTAAGACTTTAGAACAAATCCTAGCAGATAATTCTGGCAAA
TCAGTTGAGCAAATCCACGCAGACGCTGAACGTGATTACTGGATGAGTGCCCAAGAAACTCTTGACTACGGTTTTATTGA
CGAAATTATGGCTAATAATTCTTTGAATTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	94.898	100	0.949
clpP	Streptococcus pneumoniae R6	94.898	100	0.949
clpP	Streptococcus pneumoniae TIGR4	94.898	100	0.949
clpP	Streptococcus pneumoniae D39	94.898	100	0.949
clpP	Streptococcus pyogenes JRS4	91.795	99.49	0.913
clpP	Streptococcus pyogenes MGAS315	91.795	99.49	0.913
clpP	Streptococcus thermophilus LMD-9	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.692	99.49	0.872
clpP	Lactococcus lactis subsp. cremoris KW2	87.179	99.49	0.867
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	56.771	97.959	0.556