Detailed information NTG0459278

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: JHW37_RS28280
• Genome accession: NZ_CP068238
• Coordinates: 6041090..6042583 (+)
• Length: 497 a.a.
• NCBI ID: WP_053817917.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain A39-1
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6036090..6047583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JHW37_RS28250 (JHW37_28255)	-	6036140..6037525 (+)	1386	WP_043102161.1	PLP-dependent aminotransferase family protein	-
JHW37_RS28255 (JHW37_28260)	sutA	6037589..6037906 (-)	318	WP_003156037.1	transcriptional regulator SutA	-
JHW37_RS28260 (JHW37_28265)	-	6037984..6038409 (-)	426	WP_003156034.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
JHW37_RS28265 (JHW37_28270)	-	6038637..6039965 (-)	1329	WP_012077884.1	ammonium transporter	-
JHW37_RS28270 (JHW37_28275)	glnK	6040006..6040344 (-)	339	WP_003096476.1	P-II family nitrogen regulator	-
JHW37_RS28275 (JHW37_28280)	-	6040784..6041044 (+)	261	WP_012077885.1	accessory factor UbiK family protein	-
JHW37_RS28280 (JHW37_28285)	comM	6041090..6042583 (+)	1494	WP_053817917.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
JHW37_RS28285 (JHW37_28290)	betT	6042709..6044694 (+)	1986	WP_012077913.1	choline BCCT transporter BetT	-
JHW37_RS28290 (JHW37_28295)	-	6045126..6045440 (-)	315	WP_043099366.1	hypothetical protein	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 53125.95 Da
• Isoelectric Point: 8.0968

>NTDB_id=459278 JHW37_RS28280 WP_053817917.1 6041090..6042583(+) (comM) [Pseudomonas aeruginosa strain A39-1]
MSLAIVHSRAQVGVEAPCVSVEAHLANGLPSLTLVGLPETAVRESKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGR
FDLAIALGILSASGQLPGAALAGLECLGELALSGAIRPVRGVLPAAMAARDARRVLVVPKENAEEASLASGLTVYAVEHL
LEIAGHLSGQSPLSPYQARGLLREPCPYPDLAEVQGQATAKRALLVAAAGAHNLLFSGPPGTGKTLLASRLPGLLPTLGE
DEALEVAAIHSVASHVPLSHWPQRPFRQPHHSASAPALVGGGSRPQPGEITLAHQGVLFLDELPEFDRKVLEVLREPLES
GEIVIARANGRVRFPARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLERIDLHVSVLRESTSLQPGRGE
TTTREVSERVGAARQRQLARQGCANAHLDLLGMHRNCALAEADRRWLEAAGERLELSLRALHRILKVARTLADLDERQHI
ERQHLAEALQYRPSASG

Nucleotide

• Length: 1494 bp

>NTDB_id=459278 JHW37_RS28280 WP_053817917.1 6041090..6042583(+) (comM) [Pseudomonas aeruginosa strain A39-1]
ATGTCCCTGGCGATTGTCCATAGCCGAGCCCAGGTCGGCGTCGAAGCACCCTGCGTCAGCGTCGAGGCGCACCTGGCCAA
CGGCCTGCCCTCGCTGACCCTGGTCGGCCTGCCGGAGACCGCGGTACGCGAGAGCAAGGACCGCGTGCGCAGCGCCCTGC
TCAACGCCGGCTTCGACTTTCCCGCCCGGCGCATCACCCTCAACCTCGCCCCCGCCGACCTGCCCAAGGACGGCGGCCGC
TTCGACCTGGCCATCGCCCTCGGCATCCTCTCCGCCAGCGGCCAGTTGCCCGGCGCCGCCCTCGCTGGCCTGGAGTGCCT
TGGCGAGCTGGCCCTGTCCGGCGCGATCCGACCGGTACGGGGCGTATTGCCGGCCGCGATGGCGGCGCGCGACGCAAGAC
GAGTTCTGGTGGTGCCGAAGGAAAATGCCGAAGAAGCCAGCCTGGCCAGCGGCCTGACGGTGTACGCGGTCGAGCACCTG
CTGGAGATCGCCGGGCACCTCTCCGGCCAGTCGCCGCTGTCGCCCTACCAGGCGCGCGGGTTGCTCCGCGAACCGTGCCC
CTATCCCGACCTGGCCGAGGTACAGGGCCAGGCAACGGCCAAGCGCGCCCTGCTGGTTGCCGCCGCCGGCGCGCACAACC
TCCTGTTCAGCGGCCCGCCGGGCACCGGCAAGACGCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGACGCTCGGCGAG
GACGAGGCGCTGGAGGTCGCGGCGATCCATTCGGTGGCCAGCCACGTCCCGCTCAGCCACTGGCCGCAGCGGCCGTTCCG
CCAGCCACACCACTCCGCCTCGGCACCGGCGCTGGTCGGCGGCGGCAGCCGCCCGCAGCCGGGCGAGATCACCCTGGCGC
ACCAGGGCGTGCTGTTCCTCGACGAACTGCCGGAGTTCGACCGCAAGGTCCTGGAAGTGCTGCGCGAGCCGCTGGAAAGC
GGCGAGATCGTCATCGCCCGAGCCAACGGCCGGGTGCGCTTCCCCGCGCGCTTCCAACTGGTGGCGGCGATGAACCCCTG
CCCCTGCGGCTACCTCGGCGATCCCAGCGGCCGCTGCCGCTGCACCCCGGAGCAGGTCCAGCGCTATCGCGGCAAGCTCT
CCGGACCGCTGCTCGAGCGCATCGACCTGCACGTCAGCGTGCTCCGCGAAAGCACCAGCCTGCAGCCGGGCCGCGGCGAA
ACCACCACCCGCGAGGTCAGCGAGCGGGTCGGCGCCGCACGGCAACGGCAACTGGCCCGCCAGGGCTGTGCCAACGCCCA
CCTCGACCTGCTGGGCATGCACCGCAACTGTGCGCTCGCCGAAGCGGACCGTCGCTGGCTGGAGGCTGCCGGAGAGCGCC
TGGAACTTTCCTTGCGCGCCTTGCATCGCATACTCAAGGTAGCCCGGACGCTGGCCGATCTGGACGAAAGGCAGCACATC
GAGCGCCAGCACCTCGCGGAAGCCCTGCAATACCGGCCGTCAGCGTCAGGTTGA

Domains

Predicted by InterProScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-492)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	56.452	99.799	0.563
comM	Vibrio cholerae O1 biovar El Tor strain E7946	56.048	99.799	0.559
comM	Vibrio cholerae strain A1552	56.048	99.799	0.559
comM	Haemophilus influenzae Rd KW20	55.378	100	0.559
comM	Glaesserella parasuis strain SC1401	54.4	100	0.547
comM	Acinetobacter baylyi ADP1	54.049	99.396	0.537
comM	Legionella pneumophila str. Paris	48.387	99.799	0.483
comM	Legionella pneumophila strain ERS1305867	48.387	99.799	0.483
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.817	100	0.463
comM	Helicobacter pylori 26695	37.924	100	0.382